Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SH2D4BQ5SQS7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SH2D4BQ5SQS7 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.33■□□□□ 0.69
SH2D4BQ5SQS7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SH2D4BQ5SQS7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SH2D4BQ5SQS7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.33■□□□□ 0.69
SH2D4BQ5SQS7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.33■□□□□ 0.69
SH2D4BQ5SQS7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SH2D4BQ5SQS7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.33■□□□□ 0.69
SH2D4BQ5SQS7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.33■□□□□ 0.69
SH2D4BQ5SQS7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SH2D4BQ5SQS7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.33■□□□□ 0.69
SH2D4BQ5SQS7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SH2D4BQ5SQS7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 AC007322.4-201ENST00000509611 723 ntBASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SH2D4BQ5SQS7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 AC137761.2-201ENST00000561729 223 ntBASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 AC145350.3-201ENST00000569033 163 ntBASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 KRT8P20-201ENST00000423953 1409 ntBASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4BQ5SQS7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 MCRIP2P1-201ENST00000394346 511 ntBASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 AP001271.2-201ENST00000624018 1556 ntBASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4BQ5SQS7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.3■□□□□ 0.68
SH2D4BQ5SQS7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.3■□□□□ 0.68
SH2D4BQ5SQS7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.3■□□□□ 0.68
SH2D4BQ5SQS7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4BQ5SQS7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4BQ5SQS7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4BQ5SQS7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.3■□□□□ 0.68
SH2D4BQ5SQS7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4BQ5SQS7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4BQ5SQS7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4BQ5SQS7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4BQ5SQS7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.3■□□□□ 0.68
SH2D4BQ5SQS7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SH2D4BQ5SQS7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.3■□□□□ 0.68
SH2D4BQ5SQS7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4BQ5SQS7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4BQ5SQS7 AC020916.1-201ENST00000587762 1774 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms