Protein–RNA interactions for Protein: Q5RKV6

EXOSC6, Exosome complex component MTR3, humanhuman

Known RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC6Q5RKV6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EXOSC6Q5RKV6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EXOSC6Q5RKV6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 AC007952.6-201ENST00000573168 2673 ntBASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 AC003957.1-201ENST00000625108 2673 ntBASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 RNA5SP413-201ENST00000516373 109 ntBASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 RNF165-205ENST00000588679 2904 ntBASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
EXOSC6Q5RKV6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
EXOSC6Q5RKV6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
EXOSC6Q5RKV6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.11■□□□□ 0.49
EXOSC6Q5RKV6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC6Q5RKV6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC6Q5RKV6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.11■□□□□ 0.49
EXOSC6Q5RKV6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.11■□□□□ 0.49
EXOSC6Q5RKV6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC6Q5RKV6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC6Q5RKV6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC6Q5RKV6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC6Q5RKV6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC6Q5RKV6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC6Q5RKV6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC6Q5RKV6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
EXOSC6Q5RKV6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.11■□□□□ 0.49
EXOSC6Q5RKV6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC6Q5RKV6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.11■□□□□ 0.49
EXOSC6Q5RKV6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 KRT8P8-201ENST00000434750 1448 ntBASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 MTDHP1-201ENST00000605323 784 ntBASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 AC069544.1-201ENST00000609399 999 ntBASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.1■□□□□ 0.49
EXOSC6Q5RKV6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EXOSC6Q5RKV6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.09■□□□□ 0.49
EXOSC6Q5RKV6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EXOSC6Q5RKV6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EXOSC6Q5RKV6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EXOSC6Q5RKV6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
EXOSC6Q5RKV6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
EXOSC6Q5RKV6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EXOSC6Q5RKV6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.09■□□□□ 0.49
EXOSC6Q5RKV6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EXOSC6Q5RKV6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EXOSC6Q5RKV6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.09■□□□□ 0.49
EXOSC6Q5RKV6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms