Protein–RNA interactions for Protein: Q4V339

CBWD6, COBW domain-containing protein 6, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6Q4V339 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CBWD6Q4V339 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.13■□□□□ 0.97
CBWD6Q4V339 MTDHP1-201ENST00000605323 784 ntBASIC21.13■□□□□ 0.97
CBWD6Q4V339 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CBWD6Q4V339 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CBWD6Q4V339 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CBWD6Q4V339 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CBWD6Q4V339 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CBWD6Q4V339 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
CBWD6Q4V339 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.13■□□□□ 0.97
CBWD6Q4V339 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CBWD6Q4V339 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.13■□□□□ 0.97
CBWD6Q4V339 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.13■□□□□ 0.97
CBWD6Q4V339 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CBWD6Q4V339 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.13■□□□□ 0.97
CBWD6Q4V339 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CBWD6Q4V339 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CBWD6Q4V339 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CBWD6Q4V339 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CBWD6Q4V339 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CBWD6Q4V339 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CBWD6Q4V339 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CBWD6Q4V339 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CBWD6Q4V339 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CBWD6Q4V339 KRT18P16-201ENST00000510337 1294 ntBASIC21.12■□□□□ 0.97
CBWD6Q4V339 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.12■□□□□ 0.97
CBWD6Q4V339 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.12■□□□□ 0.97
CBWD6Q4V339 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.12■□□□□ 0.97
CBWD6Q4V339 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CBWD6Q4V339 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CBWD6Q4V339 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CBWD6Q4V339 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CBWD6Q4V339 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CBWD6Q4V339 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
CBWD6Q4V339 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CBWD6Q4V339 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CBWD6Q4V339 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CBWD6Q4V339 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.12■□□□□ 0.97
CBWD6Q4V339 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.12■□□□□ 0.97
CBWD6Q4V339 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CBWD6Q4V339 AL032819.2-201ENST00000624543 2162 ntBASIC21.12■□□□□ 0.97
CBWD6Q4V339 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.11■□□□□ 0.97
CBWD6Q4V339 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.11■□□□□ 0.97
CBWD6Q4V339 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CBWD6Q4V339 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CBWD6Q4V339 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBWD6Q4V339 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBWD6Q4V339 KRT17P3-201ENST00000420566 1262 ntBASIC21.11■□□□□ 0.97
CBWD6Q4V339 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.11■□□□□ 0.97
CBWD6Q4V339 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CBWD6Q4V339 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.11■□□□□ 0.97
CBWD6Q4V339 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.11■□□□□ 0.97
CBWD6Q4V339 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CBWD6Q4V339 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.11■□□□□ 0.97
CBWD6Q4V339 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.11■□□□□ 0.97
CBWD6Q4V339 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.11■□□□□ 0.97
CBWD6Q4V339 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CBWD6Q4V339 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBWD6Q4V339 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBWD6Q4V339 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBWD6Q4V339 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBWD6Q4V339 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBWD6Q4V339 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.11■□□□□ 0.97
CBWD6Q4V339 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.11■□□□□ 0.97
CBWD6Q4V339 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBWD6Q4V339 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CBWD6Q4V339 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CBWD6Q4V339 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.1■□□□□ 0.97
CBWD6Q4V339 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CBWD6Q4V339 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CBWD6Q4V339 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CBWD6Q4V339 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CBWD6Q4V339 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CBWD6Q4V339 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.1■□□□□ 0.97
CBWD6Q4V339 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CBWD6Q4V339 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
CBWD6Q4V339 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CBWD6Q4V339 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CBWD6Q4V339 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CBWD6Q4V339 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.1■□□□□ 0.97
CBWD6Q4V339 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CBWD6Q4V339 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.1■□□□□ 0.97
CBWD6Q4V339 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CBWD6Q4V339 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CBWD6Q4V339 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CBWD6Q4V339 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CBWD6Q4V339 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.09■□□□□ 0.97
CBWD6Q4V339 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CBWD6Q4V339 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CBWD6Q4V339 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CBWD6Q4V339 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CBWD6Q4V339 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.09■□□□□ 0.97
CBWD6Q4V339 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CBWD6Q4V339 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CBWD6Q4V339 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CBWD6Q4V339 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CBWD6Q4V339 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.09■□□□□ 0.97
CBWD6Q4V339 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CBWD6Q4V339 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CBWD6Q4V339 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms