Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC144BQ3MJ40 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC22.71■■□□□ 1.23
CCDC144BQ3MJ40 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.71■■□□□ 1.23
CCDC144BQ3MJ40 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC144BQ3MJ40 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
CCDC144BQ3MJ40 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.23
CCDC144BQ3MJ40 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
CCDC144BQ3MJ40 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.7■■□□□ 1.23
CCDC144BQ3MJ40 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
CCDC144BQ3MJ40 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 CD177P1-201ENST00000606252 935 ntBASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC144BQ3MJ40 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 AL353708.3-201ENST00000610272 989 ntBASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC144BQ3MJ40 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 AL355355.2-201ENST00000442321 338 ntBASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CCDC144BQ3MJ40 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 AC018445.3-201ENST00000624177 1945 ntBASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 RCN1P1-201ENST00000400413 996 ntBASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144BQ3MJ40 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms