Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 ESRRAP1-201ENST00000400596 1257 ntBASIC17.26■□□□□ 0.35
HIST3H3Q16695 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.26■□□□□ 0.35
HIST3H3Q16695 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HIST3H3Q16695 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST3H3Q16695 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST3H3Q16695 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST3H3Q16695 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST3H3Q16695 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST3H3Q16695 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST3H3Q16695 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.25■□□□□ 0.35
HIST3H3Q16695 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST3H3Q16695 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST3H3Q16695 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST3H3Q16695 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.25■□□□□ 0.35
HIST3H3Q16695 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST3H3Q16695 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HIST3H3Q16695 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.25■□□□□ 0.35
HIST3H3Q16695 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST3H3Q16695 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST3H3Q16695 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HIST3H3Q16695 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.25■□□□□ 0.35
HIST3H3Q16695 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST3H3Q16695 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.25■□□□□ 0.35
HIST3H3Q16695 PRKY-204ENST00000533551 1019 ntBASIC17.25■□□□□ 0.35
HIST3H3Q16695 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.25■□□□□ 0.35
HIST3H3Q16695 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.25■□□□□ 0.35
HIST3H3Q16695 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.25■□□□□ 0.35
HIST3H3Q16695 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.25■□□□□ 0.35
HIST3H3Q16695 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.25■□□□□ 0.35
HIST3H3Q16695 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST3H3Q16695 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST3H3Q16695 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST3H3Q16695 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST3H3Q16695 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIST3H3Q16695 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIST3H3Q16695 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST3H3Q16695 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIST3H3Q16695 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST3H3Q16695 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST3H3Q16695 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST3H3Q16695 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST3H3Q16695 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST3H3Q16695 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST3H3Q16695 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST3H3Q16695 TUBB8P6-201ENST00000436895 1288 ntBASIC17.24■□□□□ 0.35
HIST3H3Q16695 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST3H3Q16695 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST3H3Q16695 CD99P1-205ENST00000527459 561 ntBASIC17.24■□□□□ 0.35
HIST3H3Q16695 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST3H3Q16695 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST3H3Q16695 AC233263.1-201ENST00000578059 224 ntBASIC17.24■□□□□ 0.35
HIST3H3Q16695 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST3H3Q16695 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.24■□□□□ 0.35
HIST3H3Q16695 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HIST3H3Q16695 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
HIST3H3Q16695 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HIST3H3Q16695 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST3H3Q16695 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HIST3H3Q16695 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST3H3Q16695 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST3H3Q16695 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST3H3Q16695 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST3H3Q16695 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms