Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.19■□□□□ 0.34
NKX6-1P78426 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NKX6-1P78426 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NKX6-1P78426 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NKX6-1P78426 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NKX6-1P78426 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NKX6-1P78426 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
NKX6-1P78426 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NKX6-1P78426 MMP23A-201ENST00000234610 1017 ntBASIC17.19■□□□□ 0.34
NKX6-1P78426 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NKX6-1P78426 AP003071.4-201ENST00000562276 1284 ntBASIC17.19■□□□□ 0.34
NKX6-1P78426 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NKX6-1P78426 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NKX6-1P78426 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.19■□□□□ 0.34
NKX6-1P78426 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.19■□□□□ 0.34
NKX6-1P78426 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NKX6-1P78426 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NKX6-1P78426 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.18■□□□□ 0.34
NKX6-1P78426 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NKX6-1P78426 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NKX6-1P78426 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NKX6-1P78426 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NKX6-1P78426 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NKX6-1P78426 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NKX6-1P78426 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.18■□□□□ 0.34
NKX6-1P78426 AC020907.5-201ENST00000624372 1936 ntBASIC17.18■□□□□ 0.34
NKX6-1P78426 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NKX6-1P78426 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NKX6-1P78426 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.18■□□□□ 0.34
NKX6-1P78426 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
NKX6-1P78426 AL049597.2-201ENST00000565575 961 ntBASIC17.18■□□□□ 0.34
NKX6-1P78426 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.18■□□□□ 0.34
NKX6-1P78426 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NKX6-1P78426 AL590326.2-201ENST00000625139 305 ntBASIC17.18■□□□□ 0.34
NKX6-1P78426 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NKX6-1P78426 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.18■□□□□ 0.34
NKX6-1P78426 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
NKX6-1P78426 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NKX6-1P78426 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
NKX6-1P78426 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NKX6-1P78426 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NKX6-1P78426 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NKX6-1P78426 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NKX6-1P78426 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.17■□□□□ 0.34
NKX6-1P78426 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
NKX6-1P78426 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NKX6-1P78426 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.17■□□□□ 0.34
NKX6-1P78426 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NKX6-1P78426 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NKX6-1P78426 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.17■□□□□ 0.34
NKX6-1P78426 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NKX6-1P78426 AL353708.3-201ENST00000610272 989 ntBASIC17.17■□□□□ 0.34
NKX6-1P78426 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NKX6-1P78426 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NKX6-1P78426 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NKX6-1P78426 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NKX6-1P78426 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NKX6-1P78426 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NKX6-1P78426 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
NKX6-1P78426 AP005212.1-201ENST00000581547 1997 ntBASIC17.17■□□□□ 0.34
NKX6-1P78426 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.16■□□□□ 0.34
NKX6-1P78426 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NKX6-1P78426 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NKX6-1P78426 AC073314.1-201ENST00000568729 2216 ntBASIC17.16■□□□□ 0.34
NKX6-1P78426 LINC01521-201ENST00000504184 1943 ntBASIC17.16■□□□□ 0.34
NKX6-1P78426 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NKX6-1P78426 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NKX6-1P78426 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NKX6-1P78426 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NKX6-1P78426 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NKX6-1P78426 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NKX6-1P78426 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.16■□□□□ 0.34
NKX6-1P78426 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.16■□□□□ 0.34
NKX6-1P78426 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.16■□□□□ 0.34
NKX6-1P78426 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NKX6-1P78426 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NKX6-1P78426 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NKX6-1P78426 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NKX6-1P78426 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.16■□□□□ 0.34
NKX6-1P78426 AC124283.5-201ENST00000624661 1809 ntBASIC17.16■□□□□ 0.34
NKX6-1P78426 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NKX6-1P78426 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NKX6-1P78426 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NKX6-1P78426 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NKX6-1P78426 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NKX6-1P78426 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NKX6-1P78426 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NKX6-1P78426 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NKX6-1P78426 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NKX6-1P78426 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NKX6-1P78426 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NKX6-1P78426 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NKX6-1P78426 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NKX6-1P78426 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NKX6-1P78426 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NKX6-1P78426 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NKX6-1P78426 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NKX6-1P78426 SMG8-203ENST00000578922 2178 ntBASIC17.15■□□□□ 0.34
NKX6-1P78426 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.15■□□□□ 0.34
NKX6-1P78426 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms