Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAE1P78406 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RAE1P78406 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.56■□□□□ 0.56
RAE1P78406 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.56■□□□□ 0.56
RAE1P78406 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.56■□□□□ 0.56
RAE1P78406 UNC93B4-201ENST00000505679 747 ntBASIC18.56■□□□□ 0.56
RAE1P78406 AL121829.2-201ENST00000620908 328 ntBASIC18.56■□□□□ 0.56
RAE1P78406 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAE1P78406 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAE1P78406 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAE1P78406 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.56■□□□□ 0.56
RAE1P78406 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.55■□□□□ 0.56
RAE1P78406 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAE1P78406 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAE1P78406 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAE1P78406 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAE1P78406 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RAE1P78406 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAE1P78406 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RAE1P78406 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAE1P78406 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAE1P78406 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAE1P78406 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.55■□□□□ 0.56
RAE1P78406 YBX1P10-201ENST00000444752 975 ntBASIC18.55■□□□□ 0.56
RAE1P78406 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.55■□□□□ 0.56
RAE1P78406 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RAE1P78406 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAE1P78406 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAE1P78406 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAE1P78406 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.55■□□□□ 0.56
RAE1P78406 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.55■□□□□ 0.56
RAE1P78406 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAE1P78406 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
RAE1P78406 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAE1P78406 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
RAE1P78406 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.54■□□□□ 0.56
RAE1P78406 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RAE1P78406 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.54■□□□□ 0.56
RAE1P78406 ZNF815P-204ENST00000434898 1737 ntBASIC18.54■□□□□ 0.56
RAE1P78406 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAE1P78406 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RAE1P78406 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RAE1P78406 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAE1P78406 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.54■□□□□ 0.56
RAE1P78406 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAE1P78406 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RAE1P78406 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAE1P78406 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAE1P78406 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAE1P78406 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAE1P78406 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAE1P78406 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAE1P78406 ID1-201ENST00000376105 1233 ntBASIC18.54■□□□□ 0.56
RAE1P78406 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
RAE1P78406 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAE1P78406 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAE1P78406 UNC93B5-201ENST00000530315 699 ntBASIC18.54■□□□□ 0.56
RAE1P78406 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.54■□□□□ 0.56
RAE1P78406 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.54■□□□□ 0.56
RAE1P78406 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.54■□□□□ 0.56
RAE1P78406 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.54■□□□□ 0.56
RAE1P78406 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.54■□□□□ 0.56
RAE1P78406 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
RAE1P78406 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAE1P78406 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.54■□□□□ 0.56
RAE1P78406 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RAE1P78406 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.54■□□□□ 0.56
RAE1P78406 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.54■□□□□ 0.56
RAE1P78406 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAE1P78406 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAE1P78406 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
RAE1P78406 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.54■□□□□ 0.56
RAE1P78406 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAE1P78406 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.53■□□□□ 0.56
RAE1P78406 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.53■□□□□ 0.56
RAE1P78406 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAE1P78406 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAE1P78406 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAE1P78406 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAE1P78406 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAE1P78406 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAE1P78406 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAE1P78406 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
RAE1P78406 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.53■□□□□ 0.56
RAE1P78406 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAE1P78406 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.53■□□□□ 0.56
RAE1P78406 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.53■□□□□ 0.56
RAE1P78406 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.53■□□□□ 0.56
RAE1P78406 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.53■□□□□ 0.56
RAE1P78406 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
RAE1P78406 AC008403.3-201ENST00000598924 454 ntBASIC18.53■□□□□ 0.56
RAE1P78406 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RAE1P78406 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.53■□□□□ 0.56
RAE1P78406 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAE1P78406 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAE1P78406 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAE1P78406 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.52■□□□□ 0.56
RAE1P78406 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RAE1P78406 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAE1P78406 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms