Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.04■□□□□ 0.64
AP1S2P56377 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S2P56377 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.04■□□□□ 0.64
AP1S2P56377 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S2P56377 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S2P56377 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
AP1S2P56377 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S2P56377 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S2P56377 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
AP1S2P56377 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.03■□□□□ 0.64
AP1S2P56377 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S2P56377 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S2P56377 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S2P56377 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S2P56377 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S2P56377 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S2P56377 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.03■□□□□ 0.64
AP1S2P56377 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.03■□□□□ 0.64
AP1S2P56377 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S2P56377 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.03■□□□□ 0.64
AP1S2P56377 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.03■□□□□ 0.64
AP1S2P56377 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.03■□□□□ 0.64
AP1S2P56377 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S2P56377 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S2P56377 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.03■□□□□ 0.64
AP1S2P56377 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S2P56377 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.03■□□□□ 0.64
AP1S2P56377 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
AP1S2P56377 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.03■□□□□ 0.64
AP1S2P56377 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S2P56377 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
AP1S2P56377 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S2P56377 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S2P56377 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S2P56377 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S2P56377 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S2P56377 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S2P56377 AC093484.2-201ENST00000580996 2166 ntBASIC19.02■□□□□ 0.64
AP1S2P56377 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S2P56377 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S2P56377 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
AP1S2P56377 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
AP1S2P56377 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S2P56377 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S2P56377 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S2P56377 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S2P56377 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.02■□□□□ 0.64
AP1S2P56377 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.02■□□□□ 0.64
AP1S2P56377 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
AP1S2P56377 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.02■□□□□ 0.64
AP1S2P56377 KRT18P16-201ENST00000510337 1294 ntBASIC19.02■□□□□ 0.64
AP1S2P56377 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.02■□□□□ 0.64
AP1S2P56377 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.02■□□□□ 0.64
AP1S2P56377 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S2P56377 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.02■□□□□ 0.64
AP1S2P56377 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S2P56377 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S2P56377 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
AP1S2P56377 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S2P56377 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S2P56377 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
AP1S2P56377 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
AP1S2P56377 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
AP1S2P56377 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
AP1S2P56377 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.02■□□□□ 0.63
AP1S2P56377 AC116562.4-201ENST00000641316 2276 ntBASIC19.02■□□□□ 0.63
AP1S2P56377 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S2P56377 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S2P56377 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.01■□□□□ 0.63
AP1S2P56377 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
AP1S2P56377 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S2P56377 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S2P56377 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
AP1S2P56377 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S2P56377 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.01■□□□□ 0.63
AP1S2P56377 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S2P56377 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
AP1S2P56377 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.01■□□□□ 0.63
AP1S2P56377 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.01■□□□□ 0.63
AP1S2P56377 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.01■□□□□ 0.63
AP1S2P56377 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S2P56377 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.01■□□□□ 0.63
AP1S2P56377 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S2P56377 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S2P56377 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.01■□□□□ 0.63
AP1S2P56377 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S2P56377 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
AP1S2P56377 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S2P56377 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S2P56377 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP1S2P56377 KRT8P8-201ENST00000434750 1448 ntBASIC19■□□□□ 0.63
AP1S2P56377 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP1S2P56377 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP1S2P56377 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP1S2P56377 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP1S2P56377 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19■□□□□ 0.63
AP1S2P56377 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19■□□□□ 0.63
AP1S2P56377 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP1S2P56377 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP1S2P56377 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms