Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.45■■□□□ 1.02
NCKAP1LP55160 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1LP55160 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1LP55160 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1LP55160 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1LP55160 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1LP55160 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.45■■□□□ 1.02
NCKAP1LP55160 AL353708.3-201ENST00000610272 989 ntBASIC21.45■■□□□ 1.02
NCKAP1LP55160 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1LP55160 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.45■■□□□ 1.02
NCKAP1LP55160 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1LP55160 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
NCKAP1LP55160 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1LP55160 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
NCKAP1LP55160 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NCKAP1LP55160 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
NCKAP1LP55160 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
NCKAP1LP55160 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NCKAP1LP55160 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
NCKAP1LP55160 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.44■■□□□ 1.02
NCKAP1LP55160 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NCKAP1LP55160 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
NCKAP1LP55160 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NCKAP1LP55160 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NCKAP1LP55160 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.44■■□□□ 1.02
NCKAP1LP55160 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.44■■□□□ 1.02
NCKAP1LP55160 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
NCKAP1LP55160 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NCKAP1LP55160 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.44■■□□□ 1.02
NCKAP1LP55160 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.44■■□□□ 1.02
NCKAP1LP55160 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCKAP1LP55160 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCKAP1LP55160 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCKAP1LP55160 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCKAP1LP55160 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCKAP1LP55160 AL158211.5-201ENST00000623583 2518 ntBASIC21.43■■□□□ 1.02
NCKAP1LP55160 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NCKAP1LP55160 AL353807.1-201ENST00000427475 662 ntBASIC21.43■■□□□ 1.02
NCKAP1LP55160 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.43■■□□□ 1.02
NCKAP1LP55160 AC008550.1-201ENST00000511500 884 ntBASIC21.43■■□□□ 1.02
NCKAP1LP55160 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NCKAP1LP55160 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.43■■□□□ 1.02
NCKAP1LP55160 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.43■■□□□ 1.02
NCKAP1LP55160 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.43■■□□□ 1.02
NCKAP1LP55160 AF186192.3-201ENST00000583427 947 ntBASIC21.43■■□□□ 1.02
NCKAP1LP55160 HLA-A-209ENST00000638375 975 ntBASIC21.43■■□□□ 1.02
NCKAP1LP55160 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.43■■□□□ 1.02
NCKAP1LP55160 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.43■■□□□ 1.02
NCKAP1LP55160 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NCKAP1LP55160 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCKAP1LP55160 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NCKAP1LP55160 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.43■■□□□ 1.02
NCKAP1LP55160 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCKAP1LP55160 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCKAP1LP55160 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCKAP1LP55160 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCKAP1LP55160 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
NCKAP1LP55160 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NCKAP1LP55160 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
NCKAP1LP55160 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
NCKAP1LP55160 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NCKAP1LP55160 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NCKAP1LP55160 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NCKAP1LP55160 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NCKAP1LP55160 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NCKAP1LP55160 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
NCKAP1LP55160 RPS2P55-201ENST00000397318 883 ntBASIC21.42■■□□□ 1.02
NCKAP1LP55160 NIFKP9-201ENST00000419265 221 ntBASIC21.42■■□□□ 1.02
NCKAP1LP55160 AC012618.2-201ENST00000428058 849 ntBASIC21.42■■□□□ 1.02
NCKAP1LP55160 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.42■■□□□ 1.02
NCKAP1LP55160 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.42■■□□□ 1.02
NCKAP1LP55160 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.42■■□□□ 1.02
NCKAP1LP55160 AC107956.1-201ENST00000494359 873 ntBASIC21.42■■□□□ 1.02
NCKAP1LP55160 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.42■■□□□ 1.02
NCKAP1LP55160 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.42■■□□□ 1.02
NCKAP1LP55160 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.42■■□□□ 1.02
NCKAP1LP55160 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NCKAP1LP55160 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NCKAP1LP55160 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.42■■□□□ 1.02
NCKAP1LP55160 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.42■■□□□ 1.02
NCKAP1LP55160 AL135905.2-201ENST00000584934 1404 ntBASIC21.42■■□□□ 1.02
NCKAP1LP55160 Z99916.2-201ENST00000604037 246 ntBASIC21.42■■□□□ 1.02
NCKAP1LP55160 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.42■■□□□ 1.02
NCKAP1LP55160 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NCKAP1LP55160 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.41■■□□□ 1.02
NCKAP1LP55160 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.41■■□□□ 1.02
NCKAP1LP55160 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.41■■□□□ 1.02
NCKAP1LP55160 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NCKAP1LP55160 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NCKAP1LP55160 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NCKAP1LP55160 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.41■■□□□ 1.02
NCKAP1LP55160 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NCKAP1LP55160 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.41■■□□□ 1.02
NCKAP1LP55160 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.41■■□□□ 1.02
NCKAP1LP55160 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.41■■□□□ 1.02
NCKAP1LP55160 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.41■■□□□ 1.02
NCKAP1LP55160 AC233702.5-201ENST00000584107 538 ntBASIC21.41■■□□□ 1.02
NCKAP1LP55160 AP006294.2-201ENST00000641667 209 ntBASIC21.41■■□□□ 1.02
NCKAP1LP55160 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NCKAP1LP55160 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms