Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDE1AP54750 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.9■■□□□ 1.42
PDE1AP54750 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.9■■□□□ 1.42
PDE1AP54750 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.9■■□□□ 1.42
PDE1AP54750 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDE1AP54750 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
PDE1AP54750 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC23.89■■□□□ 1.42
PDE1AP54750 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDE1AP54750 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PDE1AP54750 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDE1AP54750 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PDE1AP54750 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.89■■□□□ 1.42
PDE1AP54750 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PDE1AP54750 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PDE1AP54750 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDE1AP54750 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.89■■□□□ 1.42
PDE1AP54750 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDE1AP54750 KRT17P3-201ENST00000420566 1262 ntBASIC23.89■■□□□ 1.41
PDE1AP54750 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.89■■□□□ 1.41
PDE1AP54750 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.89■■□□□ 1.41
PDE1AP54750 MIR4651-201ENST00000582622 73 ntBASIC23.89■■□□□ 1.41
PDE1AP54750 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.89■■□□□ 1.41
PDE1AP54750 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PDE1AP54750 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.89■■□□□ 1.41
PDE1AP54750 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
PDE1AP54750 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
PDE1AP54750 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
PDE1AP54750 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PDE1AP54750 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PDE1AP54750 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
PDE1AP54750 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
PDE1AP54750 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDE1AP54750 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDE1AP54750 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PDE1AP54750 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.88■■□□□ 1.41
PDE1AP54750 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.88■■□□□ 1.41
PDE1AP54750 KRT8P8-201ENST00000434750 1448 ntBASIC23.88■■□□□ 1.41
PDE1AP54750 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDE1AP54750 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.88■■□□□ 1.41
PDE1AP54750 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDE1AP54750 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
PDE1AP54750 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.88■■□□□ 1.41
PDE1AP54750 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.88■■□□□ 1.41
PDE1AP54750 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PDE1AP54750 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
PDE1AP54750 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.88■■□□□ 1.41
PDE1AP54750 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.88■■□□□ 1.41
PDE1AP54750 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
PDE1AP54750 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.88■■□□□ 1.41
PDE1AP54750 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
PDE1AP54750 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDE1AP54750 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
PDE1AP54750 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.88■■□□□ 1.41
PDE1AP54750 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.88■■□□□ 1.41
PDE1AP54750 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PDE1AP54750 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PDE1AP54750 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDE1AP54750 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDE1AP54750 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE1AP54750 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE1AP54750 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.87■■□□□ 1.41
PDE1AP54750 CD99P1-205ENST00000527459 561 ntBASIC23.87■■□□□ 1.41
PDE1AP54750 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.87■■□□□ 1.41
PDE1AP54750 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.87■■□□□ 1.41
PDE1AP54750 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE1AP54750 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
PDE1AP54750 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE1AP54750 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE1AP54750 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE1AP54750 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.87■■□□□ 1.41
PDE1AP54750 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE1AP54750 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.86■■□□□ 1.41
PDE1AP54750 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PDE1AP54750 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
PDE1AP54750 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDE1AP54750 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PDE1AP54750 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.86■■□□□ 1.41
PDE1AP54750 ZNF815P-204ENST00000434898 1737 ntBASIC23.86■■□□□ 1.41
PDE1AP54750 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
PDE1AP54750 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PDE1AP54750 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDE1AP54750 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
PDE1AP54750 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDE1AP54750 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PDE1AP54750 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDE1AP54750 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.85■■□□□ 1.41
PDE1AP54750 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDE1AP54750 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.85■■□□□ 1.41
PDE1AP54750 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDE1AP54750 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDE1AP54750 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.85■■□□□ 1.41
PDE1AP54750 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.85■■□□□ 1.41
PDE1AP54750 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.85■■□□□ 1.41
PDE1AP54750 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC23.85■■□□□ 1.41
PDE1AP54750 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDE1AP54750 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDE1AP54750 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDE1AP54750 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDE1AP54750 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDE1AP54750 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms