Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA2D1P54289 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CACNA2D1P54289 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA2D1P54289 AL135905.2-201ENST00000584934 1404 ntBASIC20.72■□□□□ 0.91
CACNA2D1P54289 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.72■□□□□ 0.91
CACNA2D1P54289 TMEM179-206ENST00000616017 1645 ntBASIC20.72■□□□□ 0.91
CACNA2D1P54289 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA2D1P54289 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA2D1P54289 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA2D1P54289 TSPY15P-201ENST00000457163 923 ntBASIC20.72■□□□□ 0.91
CACNA2D1P54289 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.72■□□□□ 0.91
CACNA2D1P54289 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CACNA2D1P54289 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA2D1P54289 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA2D1P54289 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA2D1P54289 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CACNA2D1P54289 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.72■□□□□ 0.91
CACNA2D1P54289 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA2D1P54289 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CACNA2D1P54289 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA2D1P54289 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA2D1P54289 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA2D1P54289 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA2D1P54289 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA2D1P54289 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA2D1P54289 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.71■□□□□ 0.91
CACNA2D1P54289 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.71■□□□□ 0.91
CACNA2D1P54289 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.71■□□□□ 0.91
CACNA2D1P54289 FAM197Y1-201ENST00000421178 764 ntBASIC20.71■□□□□ 0.91
CACNA2D1P54289 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.71■□□□□ 0.91
CACNA2D1P54289 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.71■□□□□ 0.91
CACNA2D1P54289 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.71■□□□□ 0.91
CACNA2D1P54289 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.71■□□□□ 0.91
CACNA2D1P54289 C1QL1P1-201ENST00000568105 661 ntBASIC20.71■□□□□ 0.91
CACNA2D1P54289 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA2D1P54289 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.71■□□□□ 0.91
CACNA2D1P54289 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA2D1P54289 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CACNA2D1P54289 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.71■□□□□ 0.91
CACNA2D1P54289 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CACNA2D1P54289 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.71■□□□□ 0.91
CACNA2D1P54289 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA2D1P54289 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA2D1P54289 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CACNA2D1P54289 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CACNA2D1P54289 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.7■□□□□ 0.91
CACNA2D1P54289 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA2D1P54289 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA2D1P54289 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA2D1P54289 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA2D1P54289 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.7■□□□□ 0.9
CACNA2D1P54289 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.7■□□□□ 0.9
CACNA2D1P54289 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.7■□□□□ 0.9
CACNA2D1P54289 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA2D1P54289 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA2D1P54289 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CACNA2D1P54289 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA2D1P54289 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.7■□□□□ 0.9
CACNA2D1P54289 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.7■□□□□ 0.9
CACNA2D1P54289 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.7■□□□□ 0.9
CACNA2D1P54289 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CACNA2D1P54289 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA2D1P54289 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.7■□□□□ 0.9
CACNA2D1P54289 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA2D1P54289 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA2D1P54289 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA2D1P54289 AC009237.14-201ENST00000609975 1594 ntBASIC20.69■□□□□ 0.9
CACNA2D1P54289 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CACNA2D1P54289 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA2D1P54289 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.69■□□□□ 0.9
CACNA2D1P54289 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.69■□□□□ 0.9
CACNA2D1P54289 CD177P1-201ENST00000606252 935 ntBASIC20.69■□□□□ 0.9
CACNA2D1P54289 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA2D1P54289 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA2D1P54289 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA2D1P54289 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA2D1P54289 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA2D1P54289 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA2D1P54289 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.69■□□□□ 0.9
CACNA2D1P54289 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA2D1P54289 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA2D1P54289 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CACNA2D1P54289 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.68■□□□□ 0.9
CACNA2D1P54289 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA2D1P54289 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA2D1P54289 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.68■□□□□ 0.9
CACNA2D1P54289 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CACNA2D1P54289 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA2D1P54289 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.68■□□□□ 0.9
CACNA2D1P54289 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.68■□□□□ 0.9
CACNA2D1P54289 AL353708.3-201ENST00000610272 989 ntBASIC20.68■□□□□ 0.9
CACNA2D1P54289 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA2D1P54289 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA2D1P54289 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.68■□□□□ 0.9
CACNA2D1P54289 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA2D1P54289 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA2D1P54289 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.67■□□□□ 0.9
CACNA2D1P54289 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CACNA2D1P54289 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CACNA2D1P54289 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms