Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.83■□□□□ 0.93
BRCC3P46736 LINC01465-201ENST00000408887 1940 ntBASIC20.83■□□□□ 0.93
BRCC3P46736 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRCC3P46736 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BRCC3P46736 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRCC3P46736 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRCC3P46736 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
BRCC3P46736 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.83■□□□□ 0.93
BRCC3P46736 MIR1224-201ENST00000408193 85 ntBASIC20.83■□□□□ 0.93
BRCC3P46736 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
BRCC3P46736 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.83■□□□□ 0.93
BRCC3P46736 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.83■□□□□ 0.93
BRCC3P46736 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRCC3P46736 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.83■□□□□ 0.93
BRCC3P46736 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BRCC3P46736 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
BRCC3P46736 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.83■□□□□ 0.92
BRCC3P46736 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BRCC3P46736 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
BRCC3P46736 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
BRCC3P46736 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRCC3P46736 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.82■□□□□ 0.92
BRCC3P46736 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.82■□□□□ 0.92
BRCC3P46736 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
BRCC3P46736 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.82■□□□□ 0.92
BRCC3P46736 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.82■□□□□ 0.92
BRCC3P46736 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRCC3P46736 AC009237.14-201ENST00000609975 1594 ntBASIC20.82■□□□□ 0.92
BRCC3P46736 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRCC3P46736 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRCC3P46736 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRCC3P46736 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BRCC3P46736 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.82■□□□□ 0.92
BRCC3P46736 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.82■□□□□ 0.92
BRCC3P46736 AC011298.2-201ENST00000617989 482 ntBASIC20.82■□□□□ 0.92
BRCC3P46736 AC130371.2-201ENST00000619443 611 ntBASIC20.82■□□□□ 0.92
BRCC3P46736 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.82■□□□□ 0.92
BRCC3P46736 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRCC3P46736 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRCC3P46736 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.82■□□□□ 0.92
BRCC3P46736 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.82■□□□□ 0.92
BRCC3P46736 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
BRCC3P46736 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
BRCC3P46736 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRCC3P46736 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCC3P46736 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
BRCC3P46736 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCC3P46736 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCC3P46736 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCC3P46736 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
BRCC3P46736 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
BRCC3P46736 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
BRCC3P46736 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCC3P46736 AC112907.3-201ENST00000577781 2400 ntBASIC20.81■□□□□ 0.92
BRCC3P46736 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCC3P46736 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.81■□□□□ 0.92
BRCC3P46736 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.81■□□□□ 0.92
BRCC3P46736 AC097488.1-201ENST00000507834 756 ntBASIC20.81■□□□□ 0.92
BRCC3P46736 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCC3P46736 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.81■□□□□ 0.92
BRCC3P46736 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
BRCC3P46736 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.81■□□□□ 0.92
BRCC3P46736 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCC3P46736 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCC3P46736 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCC3P46736 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCC3P46736 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCC3P46736 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
BRCC3P46736 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRCC3P46736 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRCC3P46736 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BRCC3P46736 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.8■□□□□ 0.92
BRCC3P46736 CRYGFP-201ENST00000418459 633 ntBASIC20.8■□□□□ 0.92
BRCC3P46736 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.8■□□□□ 0.92
BRCC3P46736 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.8■□□□□ 0.92
BRCC3P46736 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.8■□□□□ 0.92
BRCC3P46736 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.8■□□□□ 0.92
BRCC3P46736 RN7SL850P-201ENST00000579959 291 ntBASIC20.8■□□□□ 0.92
BRCC3P46736 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.8■□□□□ 0.92
BRCC3P46736 DGCR10-201ENST00000609839 495 ntBASIC20.8■□□□□ 0.92
BRCC3P46736 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRCC3P46736 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.8■□□□□ 0.92
BRCC3P46736 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BRCC3P46736 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.8■□□□□ 0.92
BRCC3P46736 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
BRCC3P46736 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
BRCC3P46736 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.8■□□□□ 0.92
BRCC3P46736 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
BRCC3P46736 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRCC3P46736 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRCC3P46736 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRCC3P46736 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRCC3P46736 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRCC3P46736 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRCC3P46736 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRCC3P46736 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.79■□□□□ 0.92
BRCC3P46736 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRCC3P46736 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.79■□□□□ 0.92
BRCC3P46736 AC004951.3-201ENST00000418645 1148 ntBASIC20.79■□□□□ 0.92
BRCC3P46736 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms