Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.73■□□□□ 0.75
CHRNA4P43681 MTDHP1-201ENST00000605323 784 ntBASIC19.73■□□□□ 0.75
CHRNA4P43681 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA4P43681 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.73■□□□□ 0.75
CHRNA4P43681 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA4P43681 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA4P43681 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA4P43681 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CHRNA4P43681 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.73■□□□□ 0.75
CHRNA4P43681 Z82202.1-201ENST00000623446 1880 ntBASIC19.73■□□□□ 0.75
CHRNA4P43681 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA4P43681 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA4P43681 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA4P43681 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA4P43681 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA4P43681 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA4P43681 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA4P43681 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA4P43681 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA4P43681 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.72■□□□□ 0.75
CHRNA4P43681 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA4P43681 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.72■□□□□ 0.75
CHRNA4P43681 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.72■□□□□ 0.75
CHRNA4P43681 AC006058.3-201ENST00000606217 1069 ntBASIC19.72■□□□□ 0.75
CHRNA4P43681 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CHRNA4P43681 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA4P43681 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA4P43681 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CHRNA4P43681 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA4P43681 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA4P43681 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA4P43681 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA4P43681 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.71■□□□□ 0.75
CHRNA4P43681 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CHRNA4P43681 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA4P43681 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNA4P43681 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CHRNA4P43681 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CHRNA4P43681 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA4P43681 YBX1P10-201ENST00000444752 975 ntBASIC19.71■□□□□ 0.75
CHRNA4P43681 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNA4P43681 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.71■□□□□ 0.75
CHRNA4P43681 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA4P43681 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.71■□□□□ 0.75
CHRNA4P43681 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.71■□□□□ 0.75
CHRNA4P43681 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.71■□□□□ 0.75
CHRNA4P43681 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNA4P43681 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.71■□□□□ 0.75
CHRNA4P43681 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNA4P43681 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
CHRNA4P43681 AC073648.6-201ENST00000641589 218 ntBASIC19.71■□□□□ 0.75
CHRNA4P43681 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CHRNA4P43681 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNA4P43681 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA4P43681 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA4P43681 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA4P43681 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.71■□□□□ 0.75
CHRNA4P43681 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNA4P43681 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNA4P43681 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA4P43681 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
CHRNA4P43681 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA4P43681 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA4P43681 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA4P43681 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA4P43681 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CHRNA4P43681 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA4P43681 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.7■□□□□ 0.74
CHRNA4P43681 POU5F1P3-201ENST00000428824 1078 ntBASIC19.7■□□□□ 0.74
CHRNA4P43681 TSPY20P-201ENST00000450910 630 ntBASIC19.7■□□□□ 0.74
CHRNA4P43681 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.7■□□□□ 0.74
CHRNA4P43681 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.7■□□□□ 0.74
CHRNA4P43681 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.7■□□□□ 0.74
CHRNA4P43681 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA4P43681 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA4P43681 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA4P43681 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.7■□□□□ 0.74
CHRNA4P43681 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
CHRNA4P43681 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA4P43681 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA4P43681 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA4P43681 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.7■□□□□ 0.74
CHRNA4P43681 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA4P43681 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.7■□□□□ 0.74
CHRNA4P43681 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA4P43681 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA4P43681 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
CHRNA4P43681 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA4P43681 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA4P43681 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CHRNA4P43681 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA4P43681 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA4P43681 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CHRNA4P43681 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA4P43681 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA4P43681 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA4P43681 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA4P43681 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.69■□□□□ 0.74
CHRNA4P43681 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.69■□□□□ 0.74
CHRNA4P43681 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms