Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RFC5P40937 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RFC5P40937 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.6■■□□□ 1.05
RFC5P40937 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RFC5P40937 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFC5P40937 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.6■■□□□ 1.05
RFC5P40937 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFC5P40937 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.6■■□□□ 1.05
RFC5P40937 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.6■■□□□ 1.05
RFC5P40937 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RFC5P40937 AC116562.2-201ENST00000507042 360 ntBASIC21.6■■□□□ 1.05
RFC5P40937 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RFC5P40937 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.6■■□□□ 1.05
RFC5P40937 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.6■■□□□ 1.05
RFC5P40937 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.6■■□□□ 1.05
RFC5P40937 AC131212.4-201ENST00000623606 975 ntBASIC21.6■■□□□ 1.05
RFC5P40937 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFC5P40937 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFC5P40937 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFC5P40937 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFC5P40937 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.6■■□□□ 1.05
RFC5P40937 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFC5P40937 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFC5P40937 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RFC5P40937 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RFC5P40937 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFC5P40937 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.59■■□□□ 1.05
RFC5P40937 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.59■■□□□ 1.05
RFC5P40937 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFC5P40937 AC004980.1-204ENST00000429707 299 ntBASIC21.59■■□□□ 1.05
RFC5P40937 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
RFC5P40937 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFC5P40937 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.59■■□□□ 1.05
RFC5P40937 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.59■■□□□ 1.05
RFC5P40937 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.59■■□□□ 1.05
RFC5P40937 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RFC5P40937 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFC5P40937 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFC5P40937 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFC5P40937 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFC5P40937 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFC5P40937 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFC5P40937 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFC5P40937 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.58■■□□□ 1.05
RFC5P40937 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.58■■□□□ 1.05
RFC5P40937 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.58■■□□□ 1.05
RFC5P40937 BX088651.1-201ENST00000540551 451 ntBASIC21.58■■□□□ 1.05
RFC5P40937 REXO1L10P-201ENST00000615707 1290 ntBASIC21.58■■□□□ 1.05
RFC5P40937 REXO1L12P-201ENST00000622156 912 ntBASIC21.58■■□□□ 1.05
RFC5P40937 AC073912.3-201ENST00000624414 853 ntBASIC21.58■■□□□ 1.05
RFC5P40937 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.58■■□□□ 1.05
RFC5P40937 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFC5P40937 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RFC5P40937 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RFC5P40937 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RFC5P40937 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
RFC5P40937 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
RFC5P40937 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RFC5P40937 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFC5P40937 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.57■■□□□ 1.04
RFC5P40937 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFC5P40937 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.57■■□□□ 1.04
RFC5P40937 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.57■■□□□ 1.04
RFC5P40937 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.57■■□□□ 1.04
RFC5P40937 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RFC5P40937 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.57■■□□□ 1.04
RFC5P40937 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFC5P40937 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RFC5P40937 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFC5P40937 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RFC5P40937 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC5P40937 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RFC5P40937 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFC5P40937 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.56■■□□□ 1.04
RFC5P40937 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
RFC5P40937 TSPY15P-201ENST00000457163 923 ntBASIC21.56■■□□□ 1.04
RFC5P40937 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.56■■□□□ 1.04
RFC5P40937 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC5P40937 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFC5P40937 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RFC5P40937 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.56■■□□□ 1.04
RFC5P40937 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC5P40937 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RFC5P40937 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC5P40937 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC5P40937 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC5P40937 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.56■■□□□ 1.04
RFC5P40937 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC5P40937 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC5P40937 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.56■■□□□ 1.04
RFC5P40937 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC5P40937 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC5P40937 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RFC5P40937 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.56■■□□□ 1.04
RFC5P40937 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.56■■□□□ 1.04
RFC5P40937 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.56■■□□□ 1.04
RFC5P40937 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.55■■□□□ 1.04
RFC5P40937 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC5P40937 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC5P40937 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms