Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CLIP1P30622 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CLIP1P30622 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
CLIP1P30622 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CLIP1P30622 PRR31-201ENST00000371629 978 ntTSL 2 BASIC31.1■■■□□ 2.57
CLIP1P30622 AC008040.2-201ENST00000461049 708 ntBASIC31.1■■■□□ 2.57
CLIP1P30622 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC31.1■■■□□ 2.57
CLIP1P30622 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC31.1■■■□□ 2.57
CLIP1P30622 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
CLIP1P30622 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
CLIP1P30622 GLDC-219ENST00000640208 420 ntTSL 2 BASIC31.1■■■□□ 2.57
CLIP1P30622 LBX2-AS1-202ENST00000603175 2083 ntBASIC31.1■■■□□ 2.57
CLIP1P30622 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
CLIP1P30622 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC31.1■■■□□ 2.57
CLIP1P30622 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CLIP1P30622 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC31.1■■■□□ 2.57
CLIP1P30622 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC31.1■■■□□ 2.57
CLIP1P30622 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC31.1■■■□□ 2.57
CLIP1P30622 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC31.1■■■□□ 2.57
CLIP1P30622 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC31.1■■■□□ 2.57
CLIP1P30622 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CLIP1P30622 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC31.1■■■□□ 2.57
CLIP1P30622 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC31.09■■■□□ 2.57
CLIP1P30622 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
CLIP1P30622 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC31.09■■■□□ 2.57
CLIP1P30622 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC31.09■■■□□ 2.57
CLIP1P30622 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC31.09■■■□□ 2.57
CLIP1P30622 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC31.09■■■□□ 2.57
CLIP1P30622 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC31.09■■■□□ 2.57
CLIP1P30622 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC31.09■■■□□ 2.57
CLIP1P30622 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CLIP1P30622 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC31.09■■■□□ 2.57
CLIP1P30622 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC31.08■■■□□ 2.57
CLIP1P30622 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CLIP1P30622 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC31.08■■■□□ 2.57
CLIP1P30622 AP005242.2-201ENST00000580065 1175 ntBASIC31.08■■■□□ 2.57
CLIP1P30622 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC31.08■■■□□ 2.57
CLIP1P30622 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CLIP1P30622 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
CLIP1P30622 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC31.08■■■□□ 2.57
CLIP1P30622 CYP2D8P-201ENST00000433633 1490 ntBASIC31.08■■■□□ 2.57
CLIP1P30622 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
CLIP1P30622 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC31.07■■■□□ 2.57
CLIP1P30622 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
CLIP1P30622 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
CLIP1P30622 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
CLIP1P30622 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
CLIP1P30622 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC31.07■■■□□ 2.57
CLIP1P30622 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC31.07■■■□□ 2.57
CLIP1P30622 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.57
CLIP1P30622 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CLIP1P30622 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC31.07■■■□□ 2.56
CLIP1P30622 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
CLIP1P30622 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
CLIP1P30622 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC31.07■■■□□ 2.56
CLIP1P30622 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC31.07■■■□□ 2.56
CLIP1P30622 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
CLIP1P30622 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC31.07■■■□□ 2.56
CLIP1P30622 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CLIP1P30622 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CLIP1P30622 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC31.07■■■□□ 2.56
CLIP1P30622 P4HB-223ENST00000576390 439 ntTSL 4 BASIC31.07■■■□□ 2.56
CLIP1P30622 AC092865.7-201ENST00000641832 219 ntBASIC31.07■■■□□ 2.56
CLIP1P30622 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CLIP1P30622 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CLIP1P30622 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
CLIP1P30622 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
CLIP1P30622 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC31.06■■■□□ 2.56
CLIP1P30622 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CLIP1P30622 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
CLIP1P30622 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CLIP1P30622 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CLIP1P30622 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC31.06■■■□□ 2.56
CLIP1P30622 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
CLIP1P30622 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC31.06■■■□□ 2.56
CLIP1P30622 AC011298.2-201ENST00000617989 482 ntBASIC31.06■■■□□ 2.56
CLIP1P30622 AC010947.1-201ENST00000623454 693 ntBASIC31.06■■■□□ 2.56
CLIP1P30622 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC31.06■■■□□ 2.56
CLIP1P30622 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC31.06■■■□□ 2.56
CLIP1P30622 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CLIP1P30622 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CLIP1P30622 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC31.05■■■□□ 2.56
CLIP1P30622 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CLIP1P30622 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CLIP1P30622 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CLIP1P30622 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
CLIP1P30622 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CLIP1P30622 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
CLIP1P30622 CBFB-203ENST00000561924 584 ntTSL 5 BASIC31.05■■■□□ 2.56
CLIP1P30622 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CLIP1P30622 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
CLIP1P30622 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CLIP1P30622 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CLIP1P30622 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
CLIP1P30622 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CLIP1P30622 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CLIP1P30622 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CLIP1P30622 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC31.04■■■□□ 2.56
CLIP1P30622 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC31.04■■■□□ 2.56
CLIP1P30622 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC31.04■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms