Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
HLA-DPA1P20036 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DPA1P20036 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DPA1P20036 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DPA1P20036 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
HLA-DPA1P20036 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.74■□□□□ 0.75
HLA-DPA1P20036 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DPA1P20036 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.74■□□□□ 0.75
HLA-DPA1P20036 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DPA1P20036 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DPA1P20036 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
HLA-DPA1P20036 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DPA1P20036 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DPA1P20036 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DPA1P20036 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPA1P20036 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPA1P20036 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
HLA-DPA1P20036 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.73■□□□□ 0.75
HLA-DPA1P20036 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPA1P20036 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPA1P20036 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPA1P20036 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPA1P20036 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPA1P20036 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.73■□□□□ 0.75
HLA-DPA1P20036 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.73■□□□□ 0.75
HLA-DPA1P20036 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
HLA-DPA1P20036 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPA1P20036 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPA1P20036 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HLA-DPA1P20036 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPA1P20036 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DPA1P20036 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 MTDHP1-201ENST00000605323 784 ntBASIC19.71■□□□□ 0.75
HLA-DPA1P20036 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DPA1P20036 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 KRT18P16-201ENST00000510337 1294 ntBASIC19.7■□□□□ 0.74
HLA-DPA1P20036 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DPA1P20036 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms