Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.13■□□□□ 0.81
ERCC2P18074 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
ERCC2P18074 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC2P18074 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC2P18074 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
ERCC2P18074 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC2P18074 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC2P18074 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.13■□□□□ 0.81
ERCC2P18074 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC2P18074 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC2P18074 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC2P18074 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC2P18074 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC2P18074 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.12■□□□□ 0.81
ERCC2P18074 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
ERCC2P18074 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC2P18074 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC2P18074 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.12■□□□□ 0.81
ERCC2P18074 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC2P18074 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC2P18074 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC2P18074 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC2P18074 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.12■□□□□ 0.81
ERCC2P18074 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.12■□□□□ 0.81
ERCC2P18074 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.12■□□□□ 0.81
ERCC2P18074 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC2P18074 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
ERCC2P18074 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC2P18074 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.12■□□□□ 0.81
ERCC2P18074 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.12■□□□□ 0.81
ERCC2P18074 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC2P18074 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC2P18074 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC2P18074 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ERCC2P18074 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC2P18074 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.11■□□□□ 0.81
ERCC2P18074 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC2P18074 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC2P18074 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.11■□□□□ 0.81
ERCC2P18074 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.11■□□□□ 0.81
ERCC2P18074 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC2P18074 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC2P18074 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC2P18074 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
ERCC2P18074 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC2P18074 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC2P18074 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC2P18074 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC2P18074 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC2P18074 KRASP1-201ENST00000407852 552 ntBASIC20.11■□□□□ 0.81
ERCC2P18074 AC239809.2-201ENST00000415381 517 ntBASIC20.11■□□□□ 0.81
ERCC2P18074 TUBB8P6-201ENST00000436895 1288 ntBASIC20.11■□□□□ 0.81
ERCC2P18074 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.11■□□□□ 0.81
ERCC2P18074 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC2P18074 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC2P18074 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.11■□□□□ 0.81
ERCC2P18074 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
ERCC2P18074 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ERCC2P18074 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.11■□□□□ 0.81
ERCC2P18074 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.11■□□□□ 0.81
ERCC2P18074 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.11■□□□□ 0.81
ERCC2P18074 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ERCC2P18074 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ERCC2P18074 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ERCC2P18074 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ERCC2P18074 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ERCC2P18074 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ERCC2P18074 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.1■□□□□ 0.81
ERCC2P18074 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ERCC2P18074 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.1■□□□□ 0.81
ERCC2P18074 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
ERCC2P18074 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ERCC2P18074 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
ERCC2P18074 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.1■□□□□ 0.81
ERCC2P18074 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.1■□□□□ 0.81
ERCC2P18074 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.1■□□□□ 0.81
ERCC2P18074 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
ERCC2P18074 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
ERCC2P18074 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.1■□□□□ 0.81
ERCC2P18074 AC124016.1-201ENST00000609552 612 ntBASIC20.1■□□□□ 0.81
ERCC2P18074 ITM2C-210ENST00000620962 501 ntBASIC20.1■□□□□ 0.81
ERCC2P18074 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.1■□□□□ 0.81
ERCC2P18074 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.1■□□□□ 0.81
ERCC2P18074 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
ERCC2P18074 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ERCC2P18074 KRT8P8-201ENST00000434750 1448 ntBASIC20.1■□□□□ 0.81
ERCC2P18074 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.1■□□□□ 0.81
ERCC2P18074 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ERCC2P18074 AC093484.2-201ENST00000580996 2166 ntBASIC20.1■□□□□ 0.81
ERCC2P18074 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.09■□□□□ 0.81
ERCC2P18074 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ERCC2P18074 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
ERCC2P18074 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.09■□□□□ 0.81
ERCC2P18074 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
ERCC2P18074 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.09■□□□□ 0.81
ERCC2P18074 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
ERCC2P18074 AC116562.4-201ENST00000641316 2276 ntBASIC20.09■□□□□ 0.81
ERCC2P18074 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
ERCC2P18074 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ERCC2P18074 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms