Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCL4P13236 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CCL4P13236 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCL4P13236 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCL4P13236 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
CCL4P13236 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.49■□□□□ 0.55
CCL4P13236 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.49■□□□□ 0.55
CCL4P13236 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.49■□□□□ 0.55
CCL4P13236 CCR12P-201ENST00000446203 998 ntBASIC18.49■□□□□ 0.55
CCL4P13236 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCL4P13236 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.49■□□□□ 0.55
CCL4P13236 AC139887.4-201ENST00000607877 719 ntBASIC18.49■□□□□ 0.55
CCL4P13236 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCL4P13236 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCL4P13236 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
CCL4P13236 PKD1P6-201ENST00000343738 4769 ntBASIC18.49■□□□□ 0.55
CCL4P13236 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCL4P13236 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCL4P13236 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCL4P13236 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCL4P13236 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCL4P13236 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCL4P13236 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCL4P13236 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCL4P13236 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCL4P13236 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCL4P13236 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CCL4P13236 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.48■□□□□ 0.55
CCL4P13236 SLC25A1P2-201ENST00000430693 912 ntBASIC18.48■□□□□ 0.55
CCL4P13236 AC007663.1-201ENST00000438948 1240 ntBASIC18.48■□□□□ 0.55
CCL4P13236 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.48■□□□□ 0.55
CCL4P13236 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.48■□□□□ 0.55
CCL4P13236 AC063952.2-201ENST00000498792 1227 ntBASIC18.48■□□□□ 0.55
CCL4P13236 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.48■□□□□ 0.55
CCL4P13236 AC022616.7-201ENST00000525383 220 ntBASIC18.48■□□□□ 0.55
CCL4P13236 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.48■□□□□ 0.55
CCL4P13236 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.48■□□□□ 0.55
CCL4P13236 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCL4P13236 AL138966.2-201ENST00000621997 464 ntBASIC18.48■□□□□ 0.55
CCL4P13236 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCL4P13236 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCL4P13236 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCL4P13236 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.48■□□□□ 0.55
CCL4P13236 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCL4P13236 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.48■□□□□ 0.55
CCL4P13236 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCL4P13236 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCL4P13236 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.47■□□□□ 0.55
CCL4P13236 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCL4P13236 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CCL4P13236 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCL4P13236 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.47■□□□□ 0.55
CCL4P13236 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.47■□□□□ 0.55
CCL4P13236 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.47■□□□□ 0.55
CCL4P13236 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.47■□□□□ 0.55
CCL4P13236 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.47■□□□□ 0.55
CCL4P13236 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.47■□□□□ 0.55
CCL4P13236 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.47■□□□□ 0.55
CCL4P13236 AL160286.2-201ENST00000567150 934 ntBASIC18.47■□□□□ 0.55
CCL4P13236 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCL4P13236 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCL4P13236 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
CCL4P13236 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCL4P13236 AC020907.5-201ENST00000624372 1936 ntBASIC18.47■□□□□ 0.55
CCL4P13236 AP001271.2-201ENST00000624018 1556 ntBASIC18.47■□□□□ 0.55
CCL4P13236 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCL4P13236 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCL4P13236 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCL4P13236 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.46■□□□□ 0.55
CCL4P13236 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCL4P13236 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.46■□□□□ 0.55
CCL4P13236 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCL4P13236 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.46■□□□□ 0.55
CCL4P13236 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.46■□□□□ 0.55
CCL4P13236 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CCL4P13236 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CCL4P13236 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.46■□□□□ 0.55
CCL4P13236 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCL4P13236 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCL4P13236 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCL4P13236 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCL4P13236 AC007375.3-201ENST00000600936 2314 ntBASIC18.46■□□□□ 0.55
CCL4P13236 AC092338.2-201ENST00000568827 1415 ntBASIC18.46■□□□□ 0.55
CCL4P13236 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCL4P13236 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CCL4P13236 FEM1AP1-201ENST00000431297 1995 ntBASIC18.46■□□□□ 0.55
CCL4P13236 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.46■□□□□ 0.55
CCL4P13236 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCL4P13236 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCL4P13236 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.45■□□□□ 0.54
CCL4P13236 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCL4P13236 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.45■□□□□ 0.54
CCL4P13236 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.45■□□□□ 0.54
CCL4P13236 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCL4P13236 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCL4P13236 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.45■□□□□ 0.54
CCL4P13236 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CCL4P13236 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.45■□□□□ 0.54
CCL4P13236 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
CCL4P13236 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms