Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
KRT3P12035 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.59■□□□□ 0.89
KRT3P12035 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT3P12035 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
KRT3P12035 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT3P12035 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT3P12035 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT3P12035 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT3P12035 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
KRT3P12035 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT3P12035 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.59■□□□□ 0.89
KRT3P12035 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
KRT3P12035 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT3P12035 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT3P12035 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT3P12035 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT3P12035 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
KRT3P12035 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
KRT3P12035 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT3P12035 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT3P12035 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT3P12035 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KRT3P12035 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT3P12035 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.58■□□□□ 0.89
KRT3P12035 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT3P12035 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.58■□□□□ 0.89
KRT3P12035 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT3P12035 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT3P12035 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
KRT3P12035 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
KRT3P12035 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.58■□□□□ 0.89
KRT3P12035 AP003097.1-201ENST00000530657 1135 ntBASIC20.58■□□□□ 0.89
KRT3P12035 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
KRT3P12035 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.58■□□□□ 0.89
KRT3P12035 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRT3P12035 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.58■□□□□ 0.88
KRT3P12035 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
KRT3P12035 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KRT3P12035 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.58■□□□□ 0.88
KRT3P12035 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRT3P12035 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRT3P12035 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
KRT3P12035 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.58■□□□□ 0.88
KRT3P12035 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.58■□□□□ 0.88
KRT3P12035 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRT3P12035 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
KRT3P12035 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
KRT3P12035 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRT3P12035 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT3P12035 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT3P12035 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT3P12035 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.57■□□□□ 0.88
KRT3P12035 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRT3P12035 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.57■□□□□ 0.88
KRT3P12035 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT3P12035 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRT3P12035 AC007952.6-201ENST00000573168 2673 ntBASIC20.57■□□□□ 0.88
KRT3P12035 AC003957.1-201ENST00000625108 2673 ntBASIC20.57■□□□□ 0.88
KRT3P12035 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT3P12035 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT3P12035 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
KRT3P12035 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT3P12035 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT3P12035 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT3P12035 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT3P12035 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT3P12035 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
KRT3P12035 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT3P12035 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
KRT3P12035 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT3P12035 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
KRT3P12035 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT3P12035 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT3P12035 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.56■□□□□ 0.88
KRT3P12035 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.56■□□□□ 0.88
KRT3P12035 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
KRT3P12035 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.56■□□□□ 0.88
KRT3P12035 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
KRT3P12035 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT3P12035 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT3P12035 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
KRT3P12035 AC026366.1-201ENST00000488803 879 ntBASIC20.56■□□□□ 0.88
KRT3P12035 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT3P12035 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.56■□□□□ 0.88
KRT3P12035 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT3P12035 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT3P12035 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.56■□□□□ 0.88
KRT3P12035 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
KRT3P12035 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT3P12035 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
KRT3P12035 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT3P12035 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT3P12035 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT3P12035 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT3P12035 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT3P12035 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT3P12035 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT3P12035 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT3P12035 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT3P12035 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms