Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 AL353719.1-201ENST00000566847 864 ntBASIC22.55■■□□□ 1.2
PTPRFP10586 AL121894.2-201ENST00000602977 491 ntBASIC22.55■■□□□ 1.2
PTPRFP10586 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC22.55■■□□□ 1.2
PTPRFP10586 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC22.55■■□□□ 1.2
PTPRFP10586 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.55■■□□□ 1.2
PTPRFP10586 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTPRFP10586 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.55■■□□□ 1.2
PTPRFP10586 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PTPRFP10586 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.55■■□□□ 1.2
PTPRFP10586 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTPRFP10586 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PTPRFP10586 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
PTPRFP10586 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PTPRFP10586 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PTPRFP10586 AC112907.2-201ENST00000448639 330 ntBASIC22.55■■□□□ 1.2
PTPRFP10586 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
PTPRFP10586 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.55■■□□□ 1.2
PTPRFP10586 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC22.55■■□□□ 1.2
PTPRFP10586 CLN6-204ENST00000564752 900 ntTSL 3 BASIC22.55■■□□□ 1.2
PTPRFP10586 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.55■■□□□ 1.2
PTPRFP10586 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.54■■□□□ 1.2
PTPRFP10586 LINC01465-201ENST00000408887 1940 ntBASIC22.54■■□□□ 1.2
PTPRFP10586 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTPRFP10586 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PTPRFP10586 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
PTPRFP10586 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PTPRFP10586 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
PTPRFP10586 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PTPRFP10586 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC22.54■■□□□ 1.2
PTPRFP10586 BX664615.1-201ENST00000443558 458 ntBASIC22.54■■□□□ 1.2
PTPRFP10586 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.54■■□□□ 1.2
PTPRFP10586 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PTPRFP10586 CD81-212ENST00000526072 1172 ntTSL 5 BASIC22.54■■□□□ 1.2
PTPRFP10586 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PTPRFP10586 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.54■■□□□ 1.2
PTPRFP10586 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTPRFP10586 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PTPRFP10586 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.54■■□□□ 1.2
PTPRFP10586 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.53■■□□□ 1.2
PTPRFP10586 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PTPRFP10586 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC22.53■■□□□ 1.2
PTPRFP10586 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC22.53■■□□□ 1.2
PTPRFP10586 KRT18P38-201ENST00000449496 1282 ntBASIC22.53■■□□□ 1.2
PTPRFP10586 AC092647.4-201ENST00000457211 535 ntBASIC22.53■■□□□ 1.2
PTPRFP10586 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC22.53■■□□□ 1.2
PTPRFP10586 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC22.53■■□□□ 1.2
PTPRFP10586 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC22.53■■□□□ 1.2
PTPRFP10586 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PTPRFP10586 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PTPRFP10586 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.53■■□□□ 1.2
PTPRFP10586 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTPRFP10586 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTPRFP10586 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PTPRFP10586 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTPRFP10586 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PTPRFP10586 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC22.53■■□□□ 1.2
PTPRFP10586 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.53■■□□□ 1.2
PTPRFP10586 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.53■■□□□ 1.2
PTPRFP10586 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC22.53■■□□□ 1.2
PTPRFP10586 AC011558.1-201ENST00000623459 338 ntBASIC22.53■■□□□ 1.2
PTPRFP10586 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PTPRFP10586 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.52■■□□□ 1.2
PTPRFP10586 LINC00565-201ENST00000562710 2331 ntBASIC22.52■■□□□ 1.2
PTPRFP10586 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.52■■□□□ 1.2
PTPRFP10586 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PTPRFP10586 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTPRFP10586 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC22.52■■□□□ 1.2
PTPRFP10586 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PTPRFP10586 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC22.52■■□□□ 1.2
PTPRFP10586 HCG4P8-203ENST00000443049 980 ntBASIC22.52■■□□□ 1.2
PTPRFP10586 AL671277.2-201ENST00000458060 996 ntBASIC22.52■■□□□ 1.2
PTPRFP10586 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
PTPRFP10586 KRT18P56-201ENST00000507275 550 ntBASIC22.52■■□□□ 1.2
PTPRFP10586 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.52■■□□□ 1.2
PTPRFP10586 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC22.52■■□□□ 1.2
PTPRFP10586 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.2
PTPRFP10586 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTPRFP10586 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTPRFP10586 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTPRFP10586 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC22.51■■□□□ 1.19
PTPRFP10586 KRT18P48-201ENST00000434763 852 ntBASIC22.51■■□□□ 1.19
PTPRFP10586 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC22.51■■□□□ 1.19
PTPRFP10586 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PTPRFP10586 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTPRFP10586 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTPRFP10586 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PTPRFP10586 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.51■■□□□ 1.19
PTPRFP10586 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.51■■□□□ 1.19
PTPRFP10586 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTPRFP10586 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTPRFP10586 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTPRFP10586 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
PTPRFP10586 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTPRFP10586 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PTPRFP10586 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.5■■□□□ 1.19
PTPRFP10586 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTPRFP10586 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
PTPRFP10586 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTPRFP10586 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.5■■□□□ 1.19
PTPRFP10586 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms