Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC24.96■■□□□ 1.59
SNRPA1P09661 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
SNRPA1P09661 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.96■■□□□ 1.59
SNRPA1P09661 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.96■■□□□ 1.59
SNRPA1P09661 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SNRPA1P09661 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SNRPA1P09661 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.96■■□□□ 1.59
SNRPA1P09661 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SNRPA1P09661 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SNRPA1P09661 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
SNRPA1P09661 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
SNRPA1P09661 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.95■■□□□ 1.59
SNRPA1P09661 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.95■■□□□ 1.59
SNRPA1P09661 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC24.95■■□□□ 1.59
SNRPA1P09661 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
SNRPA1P09661 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC24.95■■□□□ 1.58
SNRPA1P09661 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
SNRPA1P09661 LINC01465-201ENST00000408887 1940 ntBASIC24.95■■□□□ 1.58
SNRPA1P09661 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
SNRPA1P09661 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
SNRPA1P09661 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNRPA1P09661 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.95■■□□□ 1.58
SNRPA1P09661 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC24.95■■□□□ 1.58
SNRPA1P09661 DUX4L26-201ENST00000489078 1255 ntBASIC24.95■■□□□ 1.58
SNRPA1P09661 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC24.95■■□□□ 1.58
SNRPA1P09661 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNRPA1P09661 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SNRPA1P09661 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
SNRPA1P09661 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNRPA1P09661 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SNRPA1P09661 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC24.94■■□□□ 1.58
SNRPA1P09661 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SNRPA1P09661 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC24.94■■□□□ 1.58
SNRPA1P09661 SLC25A1P2-201ENST00000430693 912 ntBASIC24.94■■□□□ 1.58
SNRPA1P09661 ATP5G1P1-201ENST00000448724 379 ntBASIC24.94■■□□□ 1.58
SNRPA1P09661 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC24.94■■□□□ 1.58
SNRPA1P09661 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
SNRPA1P09661 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC24.94■■□□□ 1.58
SNRPA1P09661 AC116562.4-202ENST00000641738 218 ntBASIC24.94■■□□□ 1.58
SNRPA1P09661 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SNRPA1P09661 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC24.94■■□□□ 1.58
SNRPA1P09661 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
SNRPA1P09661 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SNRPA1P09661 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SNRPA1P09661 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SNRPA1P09661 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
SNRPA1P09661 AL391422.3-201ENST00000603791 2761 ntBASIC24.93■■□□□ 1.58
SNRPA1P09661 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
SNRPA1P09661 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SNRPA1P09661 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC24.93■■□□□ 1.58
SNRPA1P09661 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SNRPA1P09661 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC24.93■■□□□ 1.58
SNRPA1P09661 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
SNRPA1P09661 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
SNRPA1P09661 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC24.93■■□□□ 1.58
SNRPA1P09661 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SNRPA1P09661 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC24.93■■□□□ 1.58
SNRPA1P09661 AC006011.2-201ENST00000621313 1158 ntBASIC24.93■■□□□ 1.58
SNRPA1P09661 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SNRPA1P09661 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC24.93■■□□□ 1.58
SNRPA1P09661 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.93■■□□□ 1.58
SNRPA1P09661 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
SNRPA1P09661 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC24.92■■□□□ 1.58
SNRPA1P09661 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC24.92■■□□□ 1.58
SNRPA1P09661 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SNRPA1P09661 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC24.92■■□□□ 1.58
SNRPA1P09661 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SNRPA1P09661 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SNRPA1P09661 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
SNRPA1P09661 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SNRPA1P09661 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC24.92■■□□□ 1.58
SNRPA1P09661 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC24.92■■□□□ 1.58
SNRPA1P09661 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC24.92■■□□□ 1.58
SNRPA1P09661 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC24.92■■□□□ 1.58
SNRPA1P09661 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC24.92■■□□□ 1.58
SNRPA1P09661 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC24.92■■□□□ 1.58
SNRPA1P09661 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC24.92■■□□□ 1.58
SNRPA1P09661 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
SNRPA1P09661 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SNRPA1P09661 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
SNRPA1P09661 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SNRPA1P09661 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SNRPA1P09661 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC24.91■■□□□ 1.58
SNRPA1P09661 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNRPA1P09661 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC24.91■■□□□ 1.58
SNRPA1P09661 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNRPA1P09661 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC24.91■■□□□ 1.58
SNRPA1P09661 HMGA1P5-201ENST00000412453 271 ntBASIC24.91■■□□□ 1.58
SNRPA1P09661 CCR12P-201ENST00000446203 998 ntBASIC24.91■■□□□ 1.58
SNRPA1P09661 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNRPA1P09661 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SNRPA1P09661 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNRPA1P09661 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNRPA1P09661 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC24.91■■□□□ 1.58
SNRPA1P09661 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNRPA1P09661 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SNRPA1P09661 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
SNRPA1P09661 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
SNRPA1P09661 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
SNRPA1P09661 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms