Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
THBS1P07996 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
THBS1P07996 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
THBS1P07996 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.98■□□□□ 0.47
THBS1P07996 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
THBS1P07996 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
THBS1P07996 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.98■□□□□ 0.47
THBS1P07996 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
THBS1P07996 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
THBS1P07996 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
THBS1P07996 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.98■□□□□ 0.47
THBS1P07996 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
THBS1P07996 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
THBS1P07996 YBX1P10-201ENST00000444752 975 ntBASIC17.98■□□□□ 0.47
THBS1P07996 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.98■□□□□ 0.47
THBS1P07996 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.98■□□□□ 0.47
THBS1P07996 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.98■□□□□ 0.47
THBS1P07996 AC098934.4-201ENST00000564127 592 ntBASIC17.98■□□□□ 0.47
THBS1P07996 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.98■□□□□ 0.47
THBS1P07996 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.98■□□□□ 0.47
THBS1P07996 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
THBS1P07996 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.98■□□□□ 0.47
THBS1P07996 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.98■□□□□ 0.47
THBS1P07996 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
THBS1P07996 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
THBS1P07996 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.98■□□□□ 0.47
THBS1P07996 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
THBS1P07996 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
THBS1P07996 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
THBS1P07996 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
THBS1P07996 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
THBS1P07996 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
THBS1P07996 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
THBS1P07996 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
THBS1P07996 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
THBS1P07996 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
THBS1P07996 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
THBS1P07996 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
THBS1P07996 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
THBS1P07996 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
THBS1P07996 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
THBS1P07996 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
THBS1P07996 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.97■□□□□ 0.47
THBS1P07996 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.97■□□□□ 0.47
THBS1P07996 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.97■□□□□ 0.47
THBS1P07996 AC120498.8-201ENST00000614275 531 ntBASIC17.97■□□□□ 0.47
THBS1P07996 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
THBS1P07996 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
THBS1P07996 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.97■□□□□ 0.47
THBS1P07996 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
THBS1P07996 AP006587.1-201ENST00000534129 1502 ntBASIC17.97■□□□□ 0.47
THBS1P07996 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
THBS1P07996 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
THBS1P07996 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
THBS1P07996 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
THBS1P07996 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
THBS1P07996 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
THBS1P07996 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.96■□□□□ 0.47
THBS1P07996 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
THBS1P07996 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.96■□□□□ 0.47
THBS1P07996 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
THBS1P07996 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
THBS1P07996 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
THBS1P07996 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
THBS1P07996 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
THBS1P07996 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
THBS1P07996 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
THBS1P07996 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
THBS1P07996 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
THBS1P07996 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.96■□□□□ 0.47
THBS1P07996 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.96■□□□□ 0.47
THBS1P07996 MIR4651-201ENST00000582622 73 ntBASIC17.96■□□□□ 0.47
THBS1P07996 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
THBS1P07996 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
THBS1P07996 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
THBS1P07996 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.96■□□□□ 0.46
THBS1P07996 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
THBS1P07996 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.96■□□□□ 0.46
THBS1P07996 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.96■□□□□ 0.46
THBS1P07996 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.96■□□□□ 0.46
THBS1P07996 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
THBS1P07996 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.95■□□□□ 0.46
THBS1P07996 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
THBS1P07996 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
THBS1P07996 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.95■□□□□ 0.46
THBS1P07996 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.95■□□□□ 0.46
THBS1P07996 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
THBS1P07996 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
THBS1P07996 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
THBS1P07996 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
THBS1P07996 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
THBS1P07996 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.95■□□□□ 0.46
THBS1P07996 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
THBS1P07996 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.95■□□□□ 0.46
THBS1P07996 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.95■□□□□ 0.46
THBS1P07996 AL121829.2-201ENST00000620908 328 ntBASIC17.95■□□□□ 0.46
THBS1P07996 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
THBS1P07996 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.95■□□□□ 0.46
THBS1P07996 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
THBS1P07996 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms