Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.98■□□□□ 0.79
SYNCRIPO60506 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.98■□□□□ 0.79
SYNCRIPO60506 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.98■□□□□ 0.79
SYNCRIPO60506 REXO1L10P-201ENST00000615707 1290 ntBASIC19.98■□□□□ 0.79
SYNCRIPO60506 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SYNCRIPO60506 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNCRIPO60506 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNCRIPO60506 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.98■□□□□ 0.79
SYNCRIPO60506 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNCRIPO60506 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.97■□□□□ 0.79
SYNCRIPO60506 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.97■□□□□ 0.79
SYNCRIPO60506 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
SYNCRIPO60506 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNCRIPO60506 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.97■□□□□ 0.79
SYNCRIPO60506 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SYNCRIPO60506 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.97■□□□□ 0.79
SYNCRIPO60506 RBM17P1-201ENST00000453646 1190 ntBASIC19.97■□□□□ 0.79
SYNCRIPO60506 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.97■□□□□ 0.79
SYNCRIPO60506 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.97■□□□□ 0.79
SYNCRIPO60506 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SYNCRIPO60506 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.97■□□□□ 0.79
SYNCRIPO60506 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.97■□□□□ 0.79
SYNCRIPO60506 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.97■□□□□ 0.79
SYNCRIPO60506 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SYNCRIPO60506 AC018553.1-201ENST00000616682 1458 ntBASIC19.97■□□□□ 0.79
SYNCRIPO60506 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNCRIPO60506 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNCRIPO60506 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNCRIPO60506 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SYNCRIPO60506 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
SYNCRIPO60506 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SYNCRIPO60506 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SYNCRIPO60506 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.96■□□□□ 0.79
SYNCRIPO60506 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNCRIPO60506 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SYNCRIPO60506 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNCRIPO60506 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
SYNCRIPO60506 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.96■□□□□ 0.79
SYNCRIPO60506 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.96■□□□□ 0.79
SYNCRIPO60506 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.96■□□□□ 0.79
SYNCRIPO60506 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.96■□□□□ 0.79
SYNCRIPO60506 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.96■□□□□ 0.79
SYNCRIPO60506 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
SYNCRIPO60506 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.96■□□□□ 0.79
SYNCRIPO60506 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNCRIPO60506 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNCRIPO60506 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNCRIPO60506 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNCRIPO60506 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.95■□□□□ 0.79
SYNCRIPO60506 TFP1-202ENST00000475455 1573 ntBASIC19.95■□□□□ 0.78
SYNCRIPO60506 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SYNCRIPO60506 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SYNCRIPO60506 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
SYNCRIPO60506 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCRIPO60506 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.95■□□□□ 0.78
SYNCRIPO60506 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SYNCRIPO60506 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCRIPO60506 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCRIPO60506 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCRIPO60506 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCRIPO60506 YBX1P10-201ENST00000444752 975 ntBASIC19.95■□□□□ 0.78
SYNCRIPO60506 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCRIPO60506 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.95■□□□□ 0.78
SYNCRIPO60506 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.95■□□□□ 0.78
SYNCRIPO60506 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCRIPO60506 AC012306.2-201ENST00000609350 630 ntBASIC19.95■□□□□ 0.78
SYNCRIPO60506 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.95■□□□□ 0.78
SYNCRIPO60506 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCRIPO60506 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCRIPO60506 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCRIPO60506 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCRIPO60506 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCRIPO60506 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCRIPO60506 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.95■□□□□ 0.78
SYNCRIPO60506 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.94■□□□□ 0.78
SYNCRIPO60506 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCRIPO60506 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.94■□□□□ 0.78
SYNCRIPO60506 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCRIPO60506 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCRIPO60506 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCRIPO60506 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCRIPO60506 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.94■□□□□ 0.78
SYNCRIPO60506 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCRIPO60506 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.94■□□□□ 0.78
SYNCRIPO60506 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCRIPO60506 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCRIPO60506 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCRIPO60506 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.94■□□□□ 0.78
SYNCRIPO60506 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.94■□□□□ 0.78
SYNCRIPO60506 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCRIPO60506 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.94■□□□□ 0.78
SYNCRIPO60506 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCRIPO60506 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.94■□□□□ 0.78
SYNCRIPO60506 AP000525.1-201ENST00000608286 694 ntBASIC19.94■□□□□ 0.78
SYNCRIPO60506 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCRIPO60506 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.94■□□□□ 0.78
SYNCRIPO60506 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SYNCRIPO60506 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SYNCRIPO60506 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCRIPO60506 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms