Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.78■□□□□ 0.44
RNF13O43567 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF13O43567 MIR4758-201ENST00000577688 71 ntBASIC17.78■□□□□ 0.44
RNF13O43567 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF13O43567 AC092118.2-201ENST00000613495 667 ntBASIC17.78■□□□□ 0.44
RNF13O43567 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.78■□□□□ 0.44
RNF13O43567 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RNF13O43567 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RNF13O43567 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RNF13O43567 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RNF13O43567 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
RNF13O43567 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF13O43567 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF13O43567 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF13O43567 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF13O43567 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF13O43567 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF13O43567 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF13O43567 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF13O43567 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF13O43567 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF13O43567 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF13O43567 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF13O43567 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF13O43567 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF13O43567 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.77■□□□□ 0.44
RNF13O43567 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF13O43567 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF13O43567 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF13O43567 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RNF13O43567 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF13O43567 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF13O43567 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
RNF13O43567 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.77■□□□□ 0.43
RNF13O43567 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF13O43567 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.77■□□□□ 0.43
RNF13O43567 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF13O43567 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RNF13O43567 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.77■□□□□ 0.43
RNF13O43567 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF13O43567 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF13O43567 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RNF13O43567 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF13O43567 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF13O43567 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF13O43567 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF13O43567 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RNF13O43567 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF13O43567 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF13O43567 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF13O43567 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF13O43567 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF13O43567 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RNF13O43567 GUSBP6-202ENST00000438529 1198 ntBASIC17.76■□□□□ 0.43
RNF13O43567 AC091874.3-201ENST00000512672 1195 ntBASIC17.76■□□□□ 0.43
RNF13O43567 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF13O43567 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF13O43567 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF13O43567 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF13O43567 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF13O43567 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF13O43567 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF13O43567 HCG11-201ENST00000411553 5696 ntBASIC17.76■□□□□ 0.43
RNF13O43567 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF13O43567 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF13O43567 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF13O43567 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF13O43567 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF13O43567 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF13O43567 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF13O43567 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RNF13O43567 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF13O43567 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RNF13O43567 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RNF13O43567 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF13O43567 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF13O43567 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF13O43567 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF13O43567 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF13O43567 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF13O43567 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RNF13O43567 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF13O43567 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF13O43567 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF13O43567 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF13O43567 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF13O43567 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF13O43567 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF13O43567 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms