Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
COCHO43405 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.25■□□□□ 0.83
COCHO43405 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COCHO43405 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
COCHO43405 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COCHO43405 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COCHO43405 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COCHO43405 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COCHO43405 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COCHO43405 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COCHO43405 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.24■□□□□ 0.83
COCHO43405 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.24■□□□□ 0.83
COCHO43405 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.24■□□□□ 0.83
COCHO43405 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.24■□□□□ 0.83
COCHO43405 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COCHO43405 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COCHO43405 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.24■□□□□ 0.83
COCHO43405 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.24■□□□□ 0.83
COCHO43405 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.24■□□□□ 0.83
COCHO43405 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COCHO43405 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COCHO43405 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.24■□□□□ 0.83
COCHO43405 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.24■□□□□ 0.83
COCHO43405 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COCHO43405 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COCHO43405 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
COCHO43405 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
COCHO43405 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COCHO43405 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COCHO43405 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COCHO43405 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COCHO43405 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.23■□□□□ 0.83
COCHO43405 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.23■□□□□ 0.83
COCHO43405 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COCHO43405 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.23■□□□□ 0.83
COCHO43405 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.23■□□□□ 0.83
COCHO43405 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COCHO43405 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.23■□□□□ 0.83
COCHO43405 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.23■□□□□ 0.83
COCHO43405 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.23■□□□□ 0.83
COCHO43405 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
COCHO43405 AC130371.2-201ENST00000619443 611 ntBASIC20.23■□□□□ 0.83
COCHO43405 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
COCHO43405 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COCHO43405 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
COCHO43405 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.23■□□□□ 0.83
COCHO43405 CYP2D8P-201ENST00000433633 1490 ntBASIC20.23■□□□□ 0.83
COCHO43405 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COCHO43405 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.23■□□□□ 0.83
COCHO43405 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COCHO43405 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
COCHO43405 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.22■□□□□ 0.83
COCHO43405 LINC01465-201ENST00000408887 1940 ntBASIC20.22■□□□□ 0.83
COCHO43405 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 AC008040.2-201ENST00000461049 708 ntBASIC20.22■□□□□ 0.83
COCHO43405 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.22■□□□□ 0.83
COCHO43405 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.22■□□□□ 0.83
COCHO43405 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.22■□□□□ 0.83
COCHO43405 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.22■□□□□ 0.83
COCHO43405 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 DGCR10-201ENST00000609839 495 ntBASIC20.22■□□□□ 0.83
COCHO43405 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.22■□□□□ 0.83
COCHO43405 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COCHO43405 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COCHO43405 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.21■□□□□ 0.83
COCHO43405 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.21■□□□□ 0.83
COCHO43405 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COCHO43405 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.21■□□□□ 0.83
COCHO43405 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
COCHO43405 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
COCHO43405 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.21■□□□□ 0.83
COCHO43405 FAM210CP-201ENST00000445714 574 ntBASIC20.21■□□□□ 0.83
COCHO43405 Z85996.1-201ENST00000494644 937 ntBASIC20.21■□□□□ 0.83
COCHO43405 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.21■□□□□ 0.83
COCHO43405 AC011298.2-201ENST00000617989 482 ntBASIC20.21■□□□□ 0.83
COCHO43405 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.21■□□□□ 0.83
COCHO43405 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.21■□□□□ 0.83
COCHO43405 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.21■□□□□ 0.83
COCHO43405 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COCHO43405 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COCHO43405 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.21■□□□□ 0.83
COCHO43405 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms