Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC133561.5-201ENST00000635547 218 ntBASIC19.66■□□□□ 0.74
TRIM38O00635 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM38O00635 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRIM38O00635 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM38O00635 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
TRIM38O00635 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM38O00635 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM38O00635 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM38O00635 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM38O00635 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM38O00635 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM38O00635 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM38O00635 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM38O00635 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM38O00635 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM38O00635 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRIM38O00635 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRIM38O00635 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM38O00635 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM38O00635 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRIM38O00635 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.65■□□□□ 0.74
TRIM38O00635 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM38O00635 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM38O00635 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.65■□□□□ 0.74
TRIM38O00635 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM38O00635 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM38O00635 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.65■□□□□ 0.74
TRIM38O00635 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM38O00635 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM38O00635 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.64■□□□□ 0.74
TRIM38O00635 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.64■□□□□ 0.74
TRIM38O00635 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TRIM38O00635 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TRIM38O00635 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRIM38O00635 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM38O00635 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM38O00635 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM38O00635 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM38O00635 AC010331.1-201ENST00000611423 582 ntBASIC19.64■□□□□ 0.73
TRIM38O00635 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM38O00635 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM38O00635 AC124283.5-201ENST00000624661 1809 ntBASIC19.64■□□□□ 0.73
TRIM38O00635 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
TRIM38O00635 TCF3P1-201ENST00000423021 1937 ntBASIC19.64■□□□□ 0.73
TRIM38O00635 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM38O00635 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM38O00635 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM38O00635 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM38O00635 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM38O00635 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM38O00635 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TRIM38O00635 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
TRIM38O00635 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM38O00635 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
TRIM38O00635 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM38O00635 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM38O00635 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM38O00635 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM38O00635 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM38O00635 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM38O00635 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.63■□□□□ 0.73
TRIM38O00635 AL121829.2-201ENST00000620908 328 ntBASIC19.63■□□□□ 0.73
TRIM38O00635 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM38O00635 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM38O00635 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM38O00635 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM38O00635 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM38O00635 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM38O00635 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM38O00635 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM38O00635 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM38O00635 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM38O00635 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM38O00635 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM38O00635 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM38O00635 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM38O00635 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TRIM38O00635 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM38O00635 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM38O00635 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM38O00635 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms