Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 AC073195.1-201ENST00000607241 877 ntBASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 BX119927.1-201ENST00000636596 1552 ntBASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 AC099778.1-201ENST00000568593 1911 ntBASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NPIPA2E9PIF3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA2E9PIF3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 AC087499.1-201ENST00000418141 1075 ntBASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA2E9PIF3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA2E9PIF3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA2E9PIF3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NPIPA2E9PIF3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA2E9PIF3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPA2E9PIF3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.79■□□□□ 0.44
NPIPA2E9PIF3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NPIPA2E9PIF3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA2E9PIF3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPA2E9PIF3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA2E9PIF3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.79■□□□□ 0.44
NPIPA2E9PIF3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPA2E9PIF3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA2E9PIF3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NPIPA2E9PIF3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA2E9PIF3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.79■□□□□ 0.44
NPIPA2E9PIF3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms