Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 TSPY14P-201ENST00000303979 915 ntBASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 ATP5G1P1-201ENST00000448724 379 ntBASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 ECEL1P2-202ENST00000465689 757 ntBASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 AC128688.1-201ENST00000487626 519 ntBASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D3BA6NDS4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D3BA6NDS4 AC073508.3-201ENST00000619697 1419 ntBASIC19.86■□□□□ 0.77
TBC1D3BA6NDS4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D3BA6NDS4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
TBC1D3BA6NDS4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.86■□□□□ 0.77
TBC1D3BA6NDS4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D3BA6NDS4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.86■□□□□ 0.77
TBC1D3BA6NDS4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.86■□□□□ 0.77
TBC1D3BA6NDS4 FAM207BP-201ENST00000447172 505 ntBASIC19.86■□□□□ 0.77
TBC1D3BA6NDS4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.86■□□□□ 0.77
TBC1D3BA6NDS4 AC008040.2-201ENST00000461049 708 ntBASIC19.86■□□□□ 0.77
TBC1D3BA6NDS4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.86■□□□□ 0.77
TBC1D3BA6NDS4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.86■□□□□ 0.77
TBC1D3BA6NDS4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TBC1D3BA6NDS4 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.86■□□□□ 0.77
TBC1D3BA6NDS4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D3BA6NDS4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D3BA6NDS4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D3BA6NDS4 AL137060.1-201ENST00000618151 2648 ntBASIC19.85■□□□□ 0.77
TBC1D3BA6NDS4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TBC1D3BA6NDS4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.85■□□□□ 0.77
TBC1D3BA6NDS4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TBC1D3BA6NDS4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.85■□□□□ 0.77
TBC1D3BA6NDS4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.85■□□□□ 0.77
TBC1D3BA6NDS4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.85■□□□□ 0.77
TBC1D3BA6NDS4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.85■□□□□ 0.77
TBC1D3BA6NDS4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
TBC1D3BA6NDS4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D3BA6NDS4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D3BA6NDS4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D3BA6NDS4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
TBC1D3BA6NDS4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.85■□□□□ 0.77
TBC1D3BA6NDS4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.85■□□□□ 0.77
TBC1D3BA6NDS4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 AC010203.1-204ENST00000548782 407 ntBASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 AC073314.1-201ENST00000568729 2216 ntBASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D3BA6NDS4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.83■□□□□ 0.77
TBC1D3BA6NDS4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TBC1D3BA6NDS4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TBC1D3BA6NDS4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TBC1D3BA6NDS4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TBC1D3BA6NDS4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TBC1D3BA6NDS4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TBC1D3BA6NDS4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TBC1D3BA6NDS4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TBC1D3BA6NDS4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.83■□□□□ 0.77
TBC1D3BA6NDS4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.83■□□□□ 0.77
TBC1D3BA6NDS4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.83■□□□□ 0.77
TBC1D3BA6NDS4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
TBC1D3BA6NDS4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TBC1D3BA6NDS4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
TBC1D3BA6NDS4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.83■□□□□ 0.77
TBC1D3BA6NDS4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.83■□□□□ 0.77
TBC1D3BA6NDS4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TBC1D3BA6NDS4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TBC1D3BA6NDS4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
TBC1D3BA6NDS4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms