Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
HFM1A2PYH4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC29.04■■■□□ 2.24
HFM1A2PYH4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC29.04■■■□□ 2.24
HFM1A2PYH4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
HFM1A2PYH4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
HFM1A2PYH4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
HFM1A2PYH4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
HFM1A2PYH4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
HFM1A2PYH4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC29.03■■■□□ 2.24
HFM1A2PYH4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC29.03■■■□□ 2.24
HFM1A2PYH4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC29.03■■■□□ 2.24
HFM1A2PYH4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
HFM1A2PYH4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC29.03■■■□□ 2.24
HFM1A2PYH4 KRT8P9-201ENST00000558927 1449 ntBASIC29.03■■■□□ 2.24
HFM1A2PYH4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC29.03■■■□□ 2.24
HFM1A2PYH4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC29.03■■■□□ 2.24
HFM1A2PYH4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC29.03■■■□□ 2.24
HFM1A2PYH4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC29.03■■■□□ 2.24
HFM1A2PYH4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
HFM1A2PYH4 UNC93B2-201ENST00000285383 730 ntBASIC29.03■■■□□ 2.24
HFM1A2PYH4 LINC01023-201ENST00000606054 436 ntBASIC29.03■■■□□ 2.24
HFM1A2PYH4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC29.03■■■□□ 2.24
HFM1A2PYH4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC29.03■■■□□ 2.24
HFM1A2PYH4 AC131212.4-201ENST00000623606 975 ntBASIC29.03■■■□□ 2.24
HFM1A2PYH4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
HFM1A2PYH4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
HFM1A2PYH4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC29.02■■■□□ 2.24
HFM1A2PYH4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC29.02■■■□□ 2.24
HFM1A2PYH4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
HFM1A2PYH4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC29.02■■■□□ 2.24
HFM1A2PYH4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
HFM1A2PYH4 LINC01465-201ENST00000408887 1940 ntBASIC29.02■■■□□ 2.24
HFM1A2PYH4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
HFM1A2PYH4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC29.02■■■□□ 2.24
HFM1A2PYH4 KRT8P41-201ENST00000533985 1514 ntBASIC29.02■■■□□ 2.24
HFM1A2PYH4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC29.02■■■□□ 2.24
HFM1A2PYH4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
HFM1A2PYH4 AC211429.1-201ENST00000415277 523 ntBASIC29.02■■■□□ 2.24
HFM1A2PYH4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC29.02■■■□□ 2.24
HFM1A2PYH4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
HFM1A2PYH4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
HFM1A2PYH4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC29.01■■■□□ 2.23
HFM1A2PYH4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC29.01■■■□□ 2.23
HFM1A2PYH4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.23
HFM1A2PYH4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
HFM1A2PYH4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC29.01■■■□□ 2.23
HFM1A2PYH4 FITM1-202ENST00000559294 800 ntBASIC29.01■■■□□ 2.23
HFM1A2PYH4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC29.01■■■□□ 2.23
HFM1A2PYH4 AP005242.2-201ENST00000580065 1175 ntBASIC29.01■■■□□ 2.23
HFM1A2PYH4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC29.01■■■□□ 2.23
HFM1A2PYH4 TREX1-205ENST00000625293 1783 ntBASIC29.01■■■□□ 2.23
HFM1A2PYH4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
HFM1A2PYH4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
HFM1A2PYH4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
HFM1A2PYH4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
HFM1A2PYH4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC29■■■□□ 2.23
HFM1A2PYH4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC29■■■□□ 2.23
HFM1A2PYH4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
HFM1A2PYH4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
HFM1A2PYH4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC29■■■□□ 2.23
HFM1A2PYH4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC29■■■□□ 2.23
HFM1A2PYH4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC29■■■□□ 2.23
HFM1A2PYH4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC29■■■□□ 2.23
HFM1A2PYH4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC29■■■□□ 2.23
HFM1A2PYH4 AC096733.2-201ENST00000609937 1394 ntBASIC29■■■□□ 2.23
HFM1A2PYH4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC28.99■■■□□ 2.23
HFM1A2PYH4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
HFM1A2PYH4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
HFM1A2PYH4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
HFM1A2PYH4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
HFM1A2PYH4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
HFM1A2PYH4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
HFM1A2PYH4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
HFM1A2PYH4 AC008040.2-201ENST00000461049 708 ntBASIC28.99■■■□□ 2.23
HFM1A2PYH4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC28.99■■■□□ 2.23
HFM1A2PYH4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC28.99■■■□□ 2.23
HFM1A2PYH4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC28.99■■■□□ 2.23
HFM1A2PYH4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC28.99■■■□□ 2.23
HFM1A2PYH4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC28.99■■■□□ 2.23
HFM1A2PYH4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
HFM1A2PYH4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC28.99■■■□□ 2.23
HFM1A2PYH4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
HFM1A2PYH4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
HFM1A2PYH4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC28.98■■■□□ 2.23
HFM1A2PYH4 AL390955.1-201ENST00000428694 934 ntBASIC28.98■■■□□ 2.23
HFM1A2PYH4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC28.98■■■□□ 2.23
HFM1A2PYH4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
HFM1A2PYH4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC28.98■■■□□ 2.23
HFM1A2PYH4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC28.98■■■□□ 2.23
HFM1A2PYH4 AL160286.2-201ENST00000567150 934 ntBASIC28.98■■■□□ 2.23
HFM1A2PYH4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
HFM1A2PYH4 AC097493.4-201ENST00000641197 219 ntBASIC28.98■■■□□ 2.23
HFM1A2PYH4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
HFM1A2PYH4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC28.98■■■□□ 2.23
HFM1A2PYH4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC28.98■■■□□ 2.23
HFM1A2PYH4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC28.98■■■□□ 2.23
HFM1A2PYH4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC28.98■■■□□ 2.23
HFM1A2PYH4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
HFM1A2PYH4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
HFM1A2PYH4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms