Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 AC093525.10-201ENST00000625130 1569 ntBASIC17.06■□□□□ 0.32
SHISA3A0PJX4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 FZD10-202ENST00000539839 3282 ntBASIC17.05■□□□□ 0.32
SHISA3A0PJX4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.05■□□□□ 0.32
SHISA3A0PJX4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 AC004854.2-201ENST00000608450 1441 ntBASIC17.04■□□□□ 0.32
SHISA3A0PJX4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 LINC02228-203ENST00000641970 1355 ntBASIC17.04■□□□□ 0.32
SHISA3A0PJX4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms