Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 ESRRAP1-201ENST00000400596 1257 ntBASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 BX323043.1-201ENST00000641006 1765 ntBASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 TUBB8P6-201ENST00000436895 1288 ntBASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.42■□□□□ 0.86
TCRBV5S1A1TA0A578 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 KRT17P3-201ENST00000420566 1262 ntBASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 MIR4651-201ENST00000582622 73 ntBASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 SDHAP1-207ENST00000440850 2000 ntBASIC20.41■□□□□ 0.86
TCRBV5S1A1TA0A578 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.4■□□□□ 0.86
TCRBV5S1A1TA0A578 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TCRBV5S1A1TA0A578 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
TCRBV5S1A1TA0A578 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TCRBV5S1A1TA0A578 AC018445.3-201ENST00000624177 1945 ntBASIC20.39■□□□□ 0.86
TCRBV5S1A1TA0A578 TEX21P-204ENST00000641479 1693 ntBASIC20.39■□□□□ 0.86
TCRBV5S1A1TA0A578 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TCRBV5S1A1TA0A578 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TCRBV5S1A1TA0A578 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms