Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRDV1A0A1B0GX56 PCDHB18P-201ENST00000524813 2368 ntBASIC17.21■□□□□ 0.34
TRDV1A0A1B0GX56 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.21■□□□□ 0.34
TRDV1A0A1B0GX56 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRDV1A0A1B0GX56 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRDV1A0A1B0GX56 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRDV1A0A1B0GX56 AC019069.1-201ENST00000610008 1333 ntBASIC17.21■□□□□ 0.34
TRDV1A0A1B0GX56 AL354751.1-201ENST00000412768 1863 ntBASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 AC020916.1-201ENST00000587762 1774 ntBASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 AF213884.3-201ENST00000563833 479 ntBASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRDV1A0A1B0GX56 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 NOC2LP2-201ENST00000407594 1944 ntBASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 NOC2LP1-202ENST00000452600 2235 ntBASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 AC106739.1-201ENST00000617035 715 ntBASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 MIR6084-201ENST00000622012 110 ntBASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 AL133373.2-201ENST00000623187 2828 ntBASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRDV1A0A1B0GX56 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRDV1A0A1B0GX56 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms