Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 AC231657.2-201ENST00000624556 255 ntBASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF103-CHMP3A0A140T963 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 Z82202.1-201ENST00000623446 1880 ntBASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 KRT18P68-201ENST00000392293 1000 ntBASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 AC007322.1-201ENST00000426983 750 ntBASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 PTBP1P-201ENST00000554374 1601 ntBASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF103-CHMP3A0A140T963 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 CYP2T3P-201ENST00000601990 817 ntBASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF103-CHMP3A0A140T963 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF103-CHMP3A0A140T963 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RNF103-CHMP3A0A140T963 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF103-CHMP3A0A140T963 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF103-CHMP3A0A140T963 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms