Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 MIR663A-201ENST00000385250 93 ntBASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 AIRN-201ENST00000601203 4374 ntBASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV3A0A0B4J244 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV3A0A0B4J244 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 LINC01465-201ENST00000408887 1940 ntBASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 AC026185.1-201ENST00000445748 174 ntBASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRAV3A0A0B4J244 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.1
TRAV3A0A0B4J244 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.71■□□□□ 0.1
TRAV3A0A0B4J244 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
TRAV3A0A0B4J244 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV3A0A0B4J244 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV3A0A0B4J244 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV3A0A0B4J244 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 CROCCP5-201ENST00000436658 830 ntBASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms