Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 SRD5A1P1-201ENST00000442297 786 ntBASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 AC005224.4-201ENST00000583262 1652 ntBASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TRAV13-2A0A0B4J235 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 SLC47A1P1-202ENST00000449666 945 ntBASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 EEF1DP3-203ENST00000566025 782 ntBASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV13-2A0A0B4J235 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
TRAV13-2A0A0B4J235 NOC2LP2-201ENST00000407594 1944 ntBASIC12.9□□□□□ -0.35
TRAV13-2A0A0B4J235 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC12.9□□□□□ -0.35
TRAV13-2A0A0B4J235 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC12.9□□□□□ -0.35
TRAV13-2A0A0B4J235 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
TRAV13-2A0A0B4J235 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 AP000997.3-201ENST00000623333 2250 ntBASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 PTCHD3P2-201ENST00000424937 1205 ntBASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 HSD17B1P1-201ENST00000590052 955 ntBASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV13-2A0A0B4J235 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms