Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV26-1A0A087WT03 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV26-1A0A087WT03 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
TRAV26-1A0A087WT03 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV26-1A0A087WT03 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
TRAV26-1A0A087WT03 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 HLA-G-202ENST00000376815 851 ntBASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 HLA-G-203ENST00000376818 1127 ntBASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 PNMA6B-201ENST00000538162 1200 ntBASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 LINC01006-201ENST00000333319 2292 ntBASIC14.1□□□□□ -0.15
TRAV26-1A0A087WT03 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
TRAV26-1A0A087WT03 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV26-1A0A087WT03 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.08□□□□□ -0.15
TRAV26-1A0A087WT03 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 AC112907.3-201ENST00000577781 2400 ntBASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms