Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC083982.1-201ENST00000485679 344 ntBASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 MTND6P2-201ENST00000512226 524 ntBASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 AC097486.1-201ENST00000515331 210 ntBASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 OR10D4P-201ENST00000525892 951 ntBASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 OR8G3P-201ENST00000533406 921 ntBASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 AC024940.3-201ENST00000538551 316 ntBASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 AC067805.1-201ENST00000559344 470 ntBASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 SULT1C2P2-201ENST00000562517 294 ntBASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 RPL10P14-201ENST00000565265 298 ntBASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 AC124856.1-201ENST00000600819 896 ntBASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 AC034236.3-201ENST00000605999 461 ntBASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 FAM25E-202ENST00000608562 189 ntBASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 AC005224.3-201ENST00000584683 2140 ntBASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 PANDAR-201ENST00000629595 1506 ntBASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA1Q9Y5H4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AC007161.1-204ENST00000423039 460 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AC017019.1-201ENST00000426129 261 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 RNF19BPX-201ENST00000426224 625 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AL590399.2-201ENST00000427536 309 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 RBMY2QP-201ENST00000429799 1147 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 GSTM5P1-201ENST00000434751 660 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AZGP1P2-201ENST00000454506 345 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 GYG1P1-201ENST00000460864 698 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 RN7SL188P-201ENST00000469842 285 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 RPS7P6-201ENST00000485777 579 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 TRBV5-2-201ENST00000489095 273 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 PCNAP1-201ENST00000505363 709 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 RPS4XP20-201ENST00000505751 772 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 FTH1P11-201ENST00000517577 551 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 IGHV3-63-201ENST00000518422 341 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AC078899.1-201ENST00000521432 1185 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AC139697.1-201ENST00000548429 745 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AL390334.1-201ENST00000556395 450 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AC005341.1-201ENST00000571086 708 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 MTCO2P22-201ENST00000603246 681 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AP004372.1-201ENST00000604842 844 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AL353729.2-201ENST00000605859 1249 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 RNA5SP439-201ENST00000617595 124 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AL359955.1-201ENST00000455242 3275 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 GVINP1-202ENST00000531871 7271 ntBASIC5.26□□□□□ -1.57
PCDHGA1Q9Y5H4 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms