Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 Y_RNA.372-201ENST00000365599 102 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 PPIAP26-201ENST00000377951 522 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AL391419.1-201ENST00000398901 1275 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 RPL7P27-201ENST00000403775 720 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AL445183.3-201ENST00000414168 502 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 TRGV5P-201ENST00000419915 354 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 SAR1AP4-201ENST00000429225 591 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 BX679664.2-201ENST00000439282 283 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AL358832.1-201ENST00000497800 389 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 RN7SKP298-201ENST00000515950 94 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AC007537.1-201ENST00000539347 327 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AC007954.1-201ENST00000554198 494 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AC068276.1-201ENST00000605793 379 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 5S_rRNA.23-201ENST00000612086 102 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AL020991.1-201ENST00000612314 373 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AP005212.3-201ENST00000619964 528 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 MIR7854-201ENST00000620068 65 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AL357140.4-201ENST00000636827 412 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AC010325.3-201ENST00000641084 394 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 AC061975.7-201ENST00000592016 2692 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 RN7SKP237-201ENST00000364663 301 ntBASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 RN7SKP47-201ENST00000365347 328 ntBASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 Y_RNA.582-201ENST00000391023 95 ntBASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 FCF1P10-201ENST00000407590 479 ntBASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 CEACAMP8-201ENST00000413902 580 ntBASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 SDAD1P3-201ENST00000427380 333 ntBASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 ATP6V1G1P4-201ENST00000438388 335 ntBASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 RPL7P36-201ENST00000444633 681 ntBASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 RPS4XP6-201ENST00000477670 797 ntBASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 AC069528.1-202ENST00000482888 637 ntBASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 AC026801.2-201ENST00000515352 425 ntBASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 AC023632.1-201ENST00000518463 375 ntBASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 EEF1A1P17-201ENST00000547505 1275 ntBASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 AC005519.1-201ENST00000554490 601 ntBASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 AC116553.2-201ENST00000564203 463 ntBASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 RPL29P33-201ENST00000587474 316 ntBASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 AC012368.3-201ENST00000604190 219 ntBASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC8.65□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms