Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 RN7SL284P-201ENST00000498823 275 ntBASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 SNORA20.3-201ENST00000516880 132 ntBASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 AC008429.4-201ENST00000521201 182 ntBASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 NPIPB1P-202ENST00000588786 828 ntBASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 AL390816.3-201ENST00000604527 1066 ntBASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 AL390208.1-201ENST00000605885 644 ntBASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 FER-210ENST00000628534 558 ntTSL 5 BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
UBE2OQ9C0C9 MTND5P26-201ENST00000426018 1752 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC097634.1-201ENST00000604491 2467 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC093225.1-201ENST00000506867 1408 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 RNU6-253P-201ENST00000384730 105 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC098592.2-201ENST00000413158 265 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC112492.2-201ENST00000432774 1030 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 NFU1P2-201ENST00000448700 469 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 PRDX1P1-201ENST00000449329 596 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AP000852.1-201ENST00000472460 573 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC008628.2-201ENST00000502605 298 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC108941.1-201ENST00000502853 530 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 WBP1LP4-201ENST00000505043 344 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC090071.1-201ENST00000507713 644 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AL390198.2-201ENST00000510553 222 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC108043.1-201ENST00000512696 574 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 KCTD9P6-201ENST00000522306 950 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC026956.1-201ENST00000558741 396 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 ACTG1P15-201ENST00000570019 1063 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC020914.7-201ENST00000594477 545 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AP001836.1-201ENST00000604675 523 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AL022154.1-201ENST00000604698 785 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AL354760.1-201ENST00000608357 643 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 MIR7844-201ENST00000616161 122 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC127024.6-201ENST00000621598 424 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC004836.1-201ENST00000623032 634 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC025048.6-202ENST00000627667 438 ntBASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
UBE2OQ9C0C9 AC129502.1-201ENST00000623261 1654 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms