Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RPS15AP29-201ENST00000445539 400 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 YWHAEP1-201ENST00000453697 763 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.71□□□□□ -1.66
SSX3Q99909 AL603882.1-201ENST00000463059 681 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.71□□□□□ -1.66
SSX3Q99909 NENFP3-201ENST00000503735 313 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.71□□□□□ -1.66
SSX3Q99909 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.71□□□□□ -1.66
SSX3Q99909 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.71□□□□□ -1.66
SSX3Q99909 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSX3Q99909 HMGB1P19-201ENST00000517578 577 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 AC026688.1-201ENST00000520639 1168 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SSX3Q99909 AL121594.2-201ENST00000541658 472 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.71□□□□□ -1.66
SSX3Q99909 AC011445.2-201ENST00000599274 173 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SSX3Q99909 PSMA6P4-201ENST00000603247 718 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 MIR6862-1-201ENST00000613016 70 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 MIR6862-2-201ENST00000614755 70 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 MIR6729-201ENST00000618194 65 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.71□□□□□ -1.66
SSX3Q99909 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSX3Q99909 OR11H2-202ENST00000641517 1085 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 MIR193BHG-214ENST00000641765 509 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 SAMMSON-227ENST00000642114 1199 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SSX3Q99909 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
SSX3Q99909 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSX3Q99909 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
SSX3Q99909 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSX3Q99909 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSX3Q99909 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.71□□□□□ -1.66
SSX3Q99909 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.71□□□□□ -1.66
SSX3Q99909 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSX3Q99909 AL022322.2-201ENST00000624072 20397 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 AC120338.1-201ENST00000625074 1541 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SSX3Q99909 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSX3Q99909 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.71□□□□□ -1.66
SSX3Q99909 Z95327.2-201ENST00000414579 1873 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.7□□□□□ -1.66
SSX3Q99909 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX3Q99909 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSX3Q99909 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.7□□□□□ -1.66
SSX3Q99909 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.7□□□□□ -1.66
SSX3Q99909 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSX3Q99909 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.7□□□□□ -1.66
SSX3Q99909 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SSX3Q99909 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX3Q99909 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSX3Q99909 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSX3Q99909 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX3Q99909 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX3Q99909 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SSX3Q99909 RNU6-666P-201ENST00000363499 107 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX3Q99909 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SSX3Q99909 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SSX3Q99909 MIR92A2-201ENST00000385299 75 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SSX3Q99909 RN7SKP206-201ENST00000410823 293 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.7□□□□□ -1.66
SSX3Q99909 RPS20P1-201ENST00000434853 354 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 MTND2P21-201ENST00000436242 1042 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.7□□□□□ -1.66
SSX3Q99909 AC092013.1-201ENST00000438795 332 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 MTCO3P43-201ENST00000440974 771 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 GEMIN8P3-201ENST00000445417 720 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.7□□□□□ -1.66
SSX3Q99909 MTND5P8-201ENST00000449817 1083 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
SSX3Q99909 OR2AF1P-201ENST00000454899 889 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 AC093166.4-201ENST00000457867 318 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 RNU6-1218P-201ENST00000458990 108 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 RN7SL174P-201ENST00000475578 289 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.7□□□□□ -1.66
SSX3Q99909 HMGB1P3-201ENST00000502802 616 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 AC010627.1-201ENST00000503819 1294 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSX3Q99909 AC138866.2-201ENST00000508650 584 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.7□□□□□ -1.66
SSX3Q99909 AC106872.4-201ENST00000510050 523 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 AC093770.1-201ENST00000511559 571 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.7□□□□□ -1.66
SSX3Q99909 MTND2P31-201ENST00000512602 616 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.7□□□□□ -1.66
SSX3Q99909 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.7□□□□□ -1.66
SSX3Q99909 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.7□□□□□ -1.66
SSX3Q99909 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.7□□□□□ -1.66
SSX3Q99909 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.7□□□□□ -1.66
SSX3Q99909 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.7□□□□□ -1.66
SSX3Q99909 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.7□□□□□ -1.66
SSX3Q99909 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.7□□□□□ -1.66
SSX3Q99909 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.7□□□□□ -1.66
SSX3Q99909 RN7SL787P-201ENST00000613000 284 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 AL162574.1-201ENST00000615702 950 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 uc_338.9-201ENST00000617424 182 ntBASIC4.7□□□□□ -1.66
SSX3Q99909 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms