Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 AC005726.4-201ENST00000582858 458 ntBASIC8.02□□□□□ -1.13
TRIM47Q96LD4 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC8.02□□□□□ -1.13
TRIM47Q96LD4 MIR6729-201ENST00000618194 65 ntBASIC8.02□□□□□ -1.13
TRIM47Q96LD4 AC130448.2-201ENST00000624082 374 ntBASIC8.02□□□□□ -1.13
TRIM47Q96LD4 U2.22-201ENST00000636441 106 ntBASIC8.02□□□□□ -1.13
TRIM47Q96LD4 AC183089.2-201ENST00000637931 916 ntBASIC8.02□□□□□ -1.13
TRIM47Q96LD4 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AP002800.1-201ENST00000624982 2225 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 RNA5SP279-201ENST00000365513 117 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 SNORA70G-201ENST00000383923 142 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 GSTA6P-201ENST00000424144 582 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 PSMD10P2-201ENST00000432890 672 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AP002884.1-201ENST00000479691 655 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AC104108.1-201ENST00000509930 412 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 RN7SKP141-201ENST00000516167 338 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 RGS5-220ENST00000528689 566 ntTSL 5 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 TRIM51DP-201ENST00000529746 596 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AP004609.2-201ENST00000532177 190 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AC084121.1-201ENST00000533882 835 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 OLR1-209ENST00000543993 822 ntTSL 2 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AL359212.1-201ENST00000556608 614 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AC023513.1-201ENST00000604396 691 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AL355333.1-201ENST00000605632 279 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 5S_rRNA.23-201ENST00000612086 102 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AC005332.6-201ENST00000613178 446 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 HMGB1P24-202ENST00000615653 685 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 MIR7844-201ENST00000616161 122 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 RMST_10.1-201ENST00000616309 154 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 UOX-205ENST00000640983 544 ntTSL 4 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 AC132219.2-201ENST00000624416 2327 ntBASIC8.01□□□□□ -1.13
TRIM47Q96LD4 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC8.01□□□□□ -1.13
TRIM47Q96LD4 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
TRIM47Q96LD4 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC8□□□□□ -1.13
TRIM47Q96LD4 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC8□□□□□ -1.13
TRIM47Q96LD4 CDY7P-201ENST00000429883 1604 ntBASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms