Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 FRG1HP-204ENST00000617940 757 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DDX1Q92499 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.55□□□□□ -1.36
DDX1Q92499 VN2R3P-201ENST00000422626 1412 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 AC005832.2-201ENST00000538921 1430 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DDX1Q92499 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
DDX1Q92499 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DDX1Q92499 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
DDX1Q92499 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
DDX1Q92499 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DDX1Q92499 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.54□□□□□ -1.36
DDX1Q92499 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.54□□□□□ -1.36
DDX1Q92499 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DDX1Q92499 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.54□□□□□ -1.36
DDX1Q92499 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.54□□□□□ -1.36
DDX1Q92499 AC093225.1-201ENST00000506867 1408 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
DDX1Q92499 RNA5SP110-201ENST00000362638 115 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 MCTS2P-201ENST00000394552 546 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 AL136310.1-201ENST00000404926 654 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.54□□□□□ -1.36
DDX1Q92499 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
DDX1Q92499 HMGB1P49-201ENST00000418882 569 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.54□□□□□ -1.36
DDX1Q92499 AL513175.2-201ENST00000422071 443 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC6.54□□□□□ -1.36
DDX1Q92499 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.54□□□□□ -1.36
DDX1Q92499 NMNAT1P2-201ENST00000435192 860 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 PNKDP1-201ENST00000435914 430 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 DNAJC19P5-201ENST00000443295 316 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.54□□□□□ -1.36
DDX1Q92499 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.54□□□□□ -1.36
DDX1Q92499 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.54□□□□□ -1.36
DDX1Q92499 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.54□□□□□ -1.36
DDX1Q92499 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC6.54□□□□□ -1.36
DDX1Q92499 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC6.54□□□□□ -1.36
DDX1Q92499 RPL31P3-201ENST00000458430 332 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.54□□□□□ -1.36
DDX1Q92499 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.54□□□□□ -1.36
DDX1Q92499 RPS3AP22-201ENST00000488297 769 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 RPS23P1-201ENST00000491662 432 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.54□□□□□ -1.36
DDX1Q92499 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC6.54□□□□□ -1.36
DDX1Q92499 MTCO3P7-201ENST00000510008 774 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 AC119751.1-201ENST00000513357 765 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 AP003461.1-201ENST00000528866 78 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 MTCYBP41-201ENST00000528913 1123 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.54□□□□□ -1.36
DDX1Q92499 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.54□□□□□ -1.36
DDX1Q92499 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DDX1Q92499 OR11H3P-201ENST00000554547 982 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.54□□□□□ -1.36
DDX1Q92499 MIR4701-201ENST00000583094 63 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC6.54□□□□□ -1.36
DDX1Q92499 GLYATL1P2-202ENST00000588046 902 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DDX1Q92499 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.54□□□□□ -1.36
DDX1Q92499 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.54□□□□□ -1.36
DDX1Q92499 AP003465.2-201ENST00000602571 373 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 AC004890.3-201ENST00000605566 1095 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 AL021997.1-201ENST00000605757 193 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 RPSAP75-201ENST00000605848 301 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 AL133243.1-201ENST00000614487 366 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 AC011472.4-201ENST00000615848 491 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 AC010975.3-201ENST00000618727 978 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.54□□□□□ -1.36
DDX1Q92499 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.54□□□□□ -1.36
DDX1Q92499 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.54□□□□□ -1.36
DDX1Q92499 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
DDX1Q92499 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.54□□□□□ -1.36
DDX1Q92499 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.54□□□□□ -1.36
DDX1Q92499 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DDX1Q92499 AC034229.2-201ENST00000566945 2508 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.54□□□□□ -1.36
DDX1Q92499 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
DDX1Q92499 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
DDX1Q92499 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DDX1Q92499 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DDX1Q92499 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.54□□□□□ -1.36
DDX1Q92499 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.54□□□□□ -1.36
DDX1Q92499 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DDX1Q92499 AC092724.1-201ENST00000624623 3397 ntBASIC6.54□□□□□ -1.36
DDX1Q92499 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.53□□□□□ -1.36
DDX1Q92499 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.53□□□□□ -1.36
DDX1Q92499 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
DDX1Q92499 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
DDX1Q92499 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.53□□□□□ -1.36
DDX1Q92499 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
DDX1Q92499 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
DDX1Q92499 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DDX1Q92499 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
DDX1Q92499 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DDX1Q92499 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
DDX1Q92499 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
DDX1Q92499 METTL21EP-201ENST00000298105 713 ntBASIC6.53□□□□□ -1.36
DDX1Q92499 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
DDX1Q92499 SNORA70.9-201ENST00000384370 135 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms