Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CCDC112Q8NEF3 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC112Q8NEF3 AC007342.5-201ENST00000571340 2142 ntBASIC5.59□□□□□ -1.52
CCDC112Q8NEF3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
CCDC112Q8NEF3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
CCDC112Q8NEF3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
CCDC112Q8NEF3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 DHX9P1-201ENST00000436565 3076 ntBASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 AP000580.1-201ENST00000404439 358 ntBASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 E2F6P2-201ENST00000420708 748 ntBASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 AL133445.1-201ENST00000467051 452 ntBASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 SIAH1P1-201ENST00000479411 923 ntBASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 AC108693.1-201ENST00000496068 432 ntBASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 GOLGA5P1-201ENST00000507317 980 ntBASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 MIR4489-201ENST00000578869 62 ntBASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 AP005131.7-201ENST00000610087 611 ntBASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 AC008115.3-201ENST00000614874 549 ntBASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 AC132068.1-201ENST00000623805 459 ntBASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC112Q8NEF3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 MIR105-1-201ENST00000385222 81 ntBASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 AL133388.1-201ENST00000404509 287 ntBASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 NPM1P4-201ENST00000414095 812 ntBASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 AL358176.3-201ENST00000420757 454 ntBASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 RPS26P39-201ENST00000469206 341 ntBASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 OR2AO1P-201ENST00000476497 403 ntBASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 AC005868.1-201ENST00000536421 331 ntBASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 CYCSP40-201ENST00000575927 294 ntBASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 OR7E18P-201ENST00000592589 702 ntBASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 OR7M1P-201ENST00000608946 533 ntBASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 CU639417.4-201ENST00000623928 207 ntBASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC112Q8NEF3 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 MIR133B-201ENST00000362210 119 ntBASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 RNA5SP90-201ENST00000364801 99 ntBASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 MIR105-2-201ENST00000385083 81 ntBASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 AL355433.1-201ENST00000422804 300 ntBASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 CKS1BP6-201ENST00000424932 240 ntBASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 AL662874.1-201ENST00000426065 230 ntBASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 RPS11P7-201ENST00000442125 465 ntBASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC112Q8NEF3 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms