Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 AC004023.1-201ENST00000561473 1744 ntBASIC5.79□□□□□ -1.48
DTX3Q8N9I9 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
DTX3Q8N9I9 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
DTX3Q8N9I9 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.79□□□□□ -1.48
DTX3Q8N9I9 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.79□□□□□ -1.48
DTX3Q8N9I9 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.79□□□□□ -1.48
DTX3Q8N9I9 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AC092447.7-201ENST00000422212 1621 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 MIR152-201ENST00000385212 87 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 MT-TP-201ENST00000387461 68 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 RNU6-575P-201ENST00000411326 105 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AC116036.1-201ENST00000412199 367 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 OR8G2P-201ENST00000412796 908 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 EIF1P1-201ENST00000421436 341 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AL139415.2-201ENST00000431968 163 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 BX679664.2-201ENST00000439282 283 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AL592114.2-201ENST00000440142 532 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 ZNF619P1-201ENST00000446539 752 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 DDX39BP2-208ENST00000453923 258 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 SNRPGP9-201ENST00000456025 225 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 RN7SL149P-201ENST00000465197 281 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 RN7SL456P-201ENST00000469290 295 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 OR11I1P-201ENST00000486033 954 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 RN7SL776P-201ENST00000493390 268 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 RN7SL775P-201ENST00000498361 336 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 NACAP6-201ENST00000509572 622 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 DCAF13P2-201ENST00000514188 555 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 OR8G3P-201ENST00000533406 921 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 MIR744-201ENST00000578242 98 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 MIR4666A-201ENST00000580160 79 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AC024451.4-201ENST00000602578 752 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AP003973.1-201ENST00000604639 691 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 BNIP3P4-201ENST00000604946 565 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AC004948.1-201ENST00000609858 672 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AL161931.1-201ENST00000612768 246 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AC023158.2-201ENST00000614876 543 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AC026368.1-201ENST00000614934 690 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 TCL6_3.1-201ENST00000619064 137 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 AP000577.1-201ENST00000624366 878 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 NSRP1P1-201ENST00000444067 1693 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.78□□□□□ -1.48
DTX3Q8N9I9 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DTX3Q8N9I9 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.77□□□□□ -1.48
DTX3Q8N9I9 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
DTX3Q8N9I9 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DTX3Q8N9I9 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.77□□□□□ -1.49
DTX3Q8N9I9 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.77□□□□□ -1.49
DTX3Q8N9I9 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DTX3Q8N9I9 AL359976.1-201ENST00000418655 3528 ntBASIC5.77□□□□□ -1.49
DTX3Q8N9I9 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
DTX3Q8N9I9 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
DTX3Q8N9I9 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.77□□□□□ -1.49
DTX3Q8N9I9 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.77□□□□□ -1.49
DTX3Q8N9I9 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
DTX3Q8N9I9 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.77□□□□□ -1.49
DTX3Q8N9I9 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
DTX3Q8N9I9 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DTX3Q8N9I9 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
DTX3Q8N9I9 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.77□□□□□ -1.49
DTX3Q8N9I9 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
DTX3Q8N9I9 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms