Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC092079.1-201ENST00000558620 1985 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-1P43699 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-1P43699 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-1P43699 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
NKX2-1P43699 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-1P43699 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-1P43699 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX2-1P43699 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AL354854.1-201ENST00000455940 1363 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-1P43699 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NKX2-1P43699 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NKX2-1P43699 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
NKX2-1P43699 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NKX2-1P43699 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-1P43699 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX2-1P43699 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
NKX2-1P43699 METTL21EP-201ENST00000298105 713 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NKX2-1P43699 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-1P43699 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX2-1P43699 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-1P43699 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-1P43699 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NKX2-1P43699 EI24P3-201ENST00000399046 1062 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AL357752.1-201ENST00000412817 349 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AL158825.1-201ENST00000414735 521 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX2-1P43699 GNG5P5-201ENST00000420444 220 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 PNRC2P1-201ENST00000423940 420 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NKX2-1P43699 MTCO3P21-201ENST00000430791 643 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX2-1P43699 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX2-1P43699 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-1P43699 RPL19P16-201ENST00000433839 588 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AC023141.3-201ENST00000436698 278 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX2-1P43699 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-1P43699 RPL7P55-201ENST00000450522 746 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 RPL32P14-201ENST00000463196 378 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AC008379.1-201ENST00000463655 464 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.53□□□□□ -1.68
NKX2-1P43699 RN7SL570P-201ENST00000484405 292 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX2-1P43699 AC093890.1-201ENST00000502554 540 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.53□□□□□ -1.68
NKX2-1P43699 MYL12BP2-201ENST00000503948 512 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX2-1P43699 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-1P43699 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX2-1P43699 AC139365.2-201ENST00000517972 253 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX2-1P43699 CDC42P3-201ENST00000518493 633 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AC116917.1-201ENST00000520558 305 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AC092709.1-201ENST00000521355 1045 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 BUD31P1-201ENST00000521828 359 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 IGKV2-4-201ENST00000523070 340 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX2-1P43699 SOX5P1-201ENST00000524155 1127 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AC125612.1-201ENST00000547580 377 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX2-1P43699 SULT1C2P2-201ENST00000562517 294 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX2-1P43699 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX2-1P43699 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
NKX2-1P43699 AC007346.1-201ENST00000569208 867 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX2-1P43699 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX2-1P43699 MIR4760-201ENST00000585040 80 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX2-1P43699 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX2-1P43699 AL359513.1-201ENST00000614364 557 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX2-1P43699 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX2-1P43699 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-1P43699 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NKX2-1P43699 AP001002.2-201ENST00000625137 386 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX2-1P43699 AC083865.1-201ENST00000636634 831 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-1P43699 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
NKX2-1P43699 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-1P43699 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-1P43699 AC100757.1-201ENST00000616872 1835 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-1P43699 AC093311.1-201ENST00000506586 2021 ntBASIC4.53□□□□□ -1.68
NKX2-1P43699 TRIM51GP-201ENST00000534741 1350 ntBASIC4.53□□□□□ -1.69
NKX2-1P43699 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-1P43699 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-1P43699 AC093591.2-201ENST00000565254 3843 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.52□□□□□ -1.69
NKX2-1P43699 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NKX2-1P43699 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-1P43699 PWAR1-201ENST00000624188 2414 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-1P43699 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.52□□□□□ -1.69
NKX2-1P43699 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-1P43699 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms