Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL11A1P12107 RPL7P57-201ENST00000423238 740 ntBASIC5.57□□□□□ -1.52
COL11A1P12107 AC016831.4-201ENST00000438302 307 ntBASIC5.57□□□□□ -1.52
COL11A1P12107 CBX1P1-201ENST00000440184 427 ntBASIC5.57□□□□□ -1.52
COL11A1P12107 AL161722.1-201ENST00000446972 1032 ntBASIC5.57□□□□□ -1.52
COL11A1P12107 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.57□□□□□ -1.52
COL11A1P12107 RPS5P7-201ENST00000456664 608 ntBASIC5.57□□□□□ -1.52
COL11A1P12107 AC026979.1-201ENST00000492525 396 ntBASIC5.57□□□□□ -1.52
COL11A1P12107 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL11A1P12107 RNU6-709P-201ENST00000517257 104 ntBASIC5.57□□□□□ -1.52
COL11A1P12107 AP003080.1-202ENST00000526526 915 ntBASIC5.57□□□□□ -1.52
COL11A1P12107 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
COL11A1P12107 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.57□□□□□ -1.52
COL11A1P12107 AL359757.1-201ENST00000623176 255 ntBASIC5.57□□□□□ -1.52
COL11A1P12107 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
COL11A1P12107 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
COL11A1P12107 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL11A1P12107 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.57□□□□□ -1.52
COL11A1P12107 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
COL11A1P12107 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.57□□□□□ -1.52
COL11A1P12107 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL11A1P12107 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL11A1P12107 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
COL11A1P12107 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
COL11A1P12107 RBPJP2-201ENST00000618187 1444 ntBASIC5.56□□□□□ -1.52
COL11A1P12107 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
COL11A1P12107 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL11A1P12107 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.56□□□□□ -1.52
COL11A1P12107 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
COL11A1P12107 RPS16P5-201ENST00000406501 404 ntBASIC5.56□□□□□ -1.52
COL11A1P12107 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.56□□□□□ -1.52
COL11A1P12107 GLUD1P9-201ENST00000420997 1173 ntBASIC5.56□□□□□ -1.52
COL11A1P12107 AC073358.1-201ENST00000505671 684 ntBASIC5.56□□□□□ -1.52
COL11A1P12107 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.56□□□□□ -1.52
COL11A1P12107 AC134698.5-201ENST00000519444 336 ntBASIC5.56□□□□□ -1.52
COL11A1P12107 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.56□□□□□ -1.52
COL11A1P12107 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.56□□□□□ -1.52
COL11A1P12107 AP000919.1-201ENST00000582850 985 ntBASIC5.56□□□□□ -1.52
COL11A1P12107 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.56□□□□□ -1.52
COL11A1P12107 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL11A1P12107 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
COL11A1P12107 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL11A1P12107 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL11A1P12107 CASC19-260ENST00000641828 2001 ntBASIC5.56□□□□□ -1.52
COL11A1P12107 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL11A1P12107 TTC41P-205ENST00000551270 3963 ntBASIC5.56□□□□□ -1.52
COL11A1P12107 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
COL11A1P12107 SNORD113.2-201ENST00000364166 89 ntBASIC5.55□□□□□ -1.52
COL11A1P12107 RPS3AP23-201ENST00000401762 784 ntBASIC5.55□□□□□ -1.52
COL11A1P12107 RPL12P9-201ENST00000412942 488 ntBASIC5.55□□□□□ -1.52
COL11A1P12107 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.55□□□□□ -1.52
COL11A1P12107 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.55□□□□□ -1.52
COL11A1P12107 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL11A1P12107 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.55□□□□□ -1.52
COL11A1P12107 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.55□□□□□ -1.52
COL11A1P12107 AC133555.2-201ENST00000550213 292 ntBASIC5.55□□□□□ -1.52
COL11A1P12107 AC019193.2-201ENST00000610012 634 ntBASIC5.55□□□□□ -1.52
COL11A1P12107 AC007497.1-201ENST00000610421 561 ntBASIC5.55□□□□□ -1.52
COL11A1P12107 MIR6853-201ENST00000619642 74 ntBASIC5.55□□□□□ -1.52
COL11A1P12107 AC092451.3-201ENST00000625067 1343 ntBASIC5.55□□□□□ -1.52
COL11A1P12107 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL11A1P12107 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
COL11A1P12107 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.55□□□□□ -1.52
COL11A1P12107 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL11A1P12107 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.55□□□□□ -1.52
COL11A1P12107 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.55□□□□□ -1.52
COL11A1P12107 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.55□□□□□ -1.52
COL11A1P12107 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.55□□□□□ -1.52
COL11A1P12107 OR52E3P-201ENST00000452083 936 ntBASIC5.55□□□□□ -1.52
COL11A1P12107 HPRT1P1-201ENST00000509498 657 ntBASIC5.55□□□□□ -1.52
COL11A1P12107 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.55□□□□□ -1.52
COL11A1P12107 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.55□□□□□ -1.52
COL11A1P12107 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.55□□□□□ -1.52
COL11A1P12107 TVP23CP2-201ENST00000571473 623 ntBASIC5.55□□□□□ -1.52
COL11A1P12107 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL11A1P12107 FAM27B-201ENST00000610601 213 ntBASIC5.55□□□□□ -1.52
COL11A1P12107 AC091932.2-201ENST00000623014 291 ntBASIC5.55□□□□□ -1.52
COL11A1P12107 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL11A1P12107 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL11A1P12107 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL11A1P12107 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL11A1P12107 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
COL11A1P12107 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL11A1P12107 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL11A1P12107 SAMM50P1-201ENST00000455403 1399 ntBASIC5.55□□□□□ -1.52
COL11A1P12107 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
COL11A1P12107 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL11A1P12107 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
COL11A1P12107 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
COL11A1P12107 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL11A1P12107 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL11A1P12107 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL11A1P12107 SMG1P6-201ENST00000532337 2930 ntBASIC5.54□□□□□ -1.52
COL11A1P12107 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.54□□□□□ -1.52
COL11A1P12107 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.54□□□□□ -1.52
COL11A1P12107 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL11A1P12107 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COL11A1P12107 RPS21P8-201ENST00000413365 247 ntBASIC5.54□□□□□ -1.52
COL11A1P12107 RPS27AP6-201ENST00000427962 448 ntBASIC5.54□□□□□ -1.52
COL11A1P12107 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms