Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 GAPDHP48-201ENST00000436626 961 ntBASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 COX7BP2-201ENST00000437976 242 ntBASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 AC107015.1-201ENST00000466902 747 ntBASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 SSX6-203ENST00000509958 336 ntTSL 3 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 AC106800.3-201ENST00000511389 308 ntBASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 Y_RNA.710-201ENST00000516975 110 ntBASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 SNORD95-201ENST00000579879 68 ntBASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 AC022467.1-201ENST00000614738 749 ntBASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 MIR7159-201ENST00000620587 66 ntBASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 AC110597.1-201ENST00000562669 3176 ntBASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AC015689.2-201ENST00000528172 1738 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AL136531.3-201ENST00000624378 3658 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 RN7SKP292-201ENST00000365522 317 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 RNU6-549P-201ENST00000384433 107 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 MT-TP-201ENST00000387461 68 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 RSL24D1P4-201ENST00000400938 484 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 PPIAP10-201ENST00000438675 458 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AC009263.1-201ENST00000441193 1239 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AC023141.9-201ENST00000458734 412 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 RNU7-140P-201ENST00000459546 60 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 OR11I1P-201ENST00000486033 954 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AC113430.1-201ENST00000506872 718 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AC113347.3-201ENST00000509113 148 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 NDUFB4P12-201ENST00000513465 390 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 MTCYBP22-201ENST00000603788 447 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 IGKV1OR2-9-201ENST00000603957 287 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 IGKV1OR2-11-201ENST00000604120 287 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AC106791.2-201ENST00000604680 391 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AF246928.1-201ENST00000623768 87 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 TMEM75-201ENST00000624314 2165 ntBASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CSB-PGBD3P0DP91 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AC062022.1-201ENST00000451026 1684 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 NACA3P-201ENST00000359690 648 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 NPM1P38-201ENST00000403835 865 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 HMGB3P18-201ENST00000406327 590 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 FIGN-202ENST00000409634 746 ntTSL 5 BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms