Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 IGBP1P1-201ENST00000554337 1009 ntBASIC5.55□□□□□ -1.52
PCDH17O14917 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDH17O14917 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDH17O14917 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDH17O14917 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDH17O14917 AC025857.2-201ENST00000602711 238 ntBASIC5.55□□□□□ -1.52
PCDH17O14917 RPP40P2-201ENST00000603596 712 ntBASIC5.55□□□□□ -1.52
PCDH17O14917 FAM27E4-201ENST00000605259 342 ntBASIC5.55□□□□□ -1.52
PCDH17O14917 AL512624.1-201ENST00000613638 469 ntBASIC5.55□□□□□ -1.52
PCDH17O14917 AC022467.1-201ENST00000614738 749 ntBASIC5.55□□□□□ -1.52
PCDH17O14917 AC011815.3-201ENST00000624194 473 ntBASIC5.55□□□□□ -1.52
PCDH17O14917 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDH17O14917 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
PCDH17O14917 AC006927.4-201ENST00000639187 543 ntBASIC5.55□□□□□ -1.52
PCDH17O14917 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH17O14917 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
PCDH17O14917 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
PCDH17O14917 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH17O14917 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PCDH17O14917 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH17O14917 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDH17O14917 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PCDH17O14917 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
PCDH17O14917 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH17O14917 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH17O14917 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDH17O14917 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PCDH17O14917 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH17O14917 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH17O14917 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH17O14917 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDH17O14917 ZNF849P-201ENST00000594711 1566 ntBASIC5.55□□□□□ -1.52
PCDH17O14917 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDH17O14917 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
PCDH17O14917 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH17O14917 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH17O14917 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH17O14917 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDH17O14917 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDH17O14917 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH17O14917 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH17O14917 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDH17O14917 U3.10-201ENST00000364459 214 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH17O14917 MIR143-201ENST00000385300 106 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PCDH17O14917 RN7SKP286-201ENST00000410894 299 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 RN7SKP293-201ENST00000411389 296 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 RPS4XP5-201ENST00000419038 768 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 AC023128.2-201ENST00000420880 1223 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH17O14917 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDH17O14917 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDH17O14917 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH17O14917 SEPT7P3-201ENST00000455017 621 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 GTF2IP12-201ENST00000456547 356 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 RN7SL284P-201ENST00000498823 275 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH17O14917 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.54□□□□□ -1.52
PCDH17O14917 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH17O14917 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH17O14917 HMGB1P1-201ENST00000522557 636 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 AC136777.2-201ENST00000522979 358 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH17O14917 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.54□□□□□ -1.52
PCDH17O14917 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH17O14917 NPM1P35-201ENST00000533043 868 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDH17O14917 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDH17O14917 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH17O14917 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH17O14917 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH17O14917 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH17O14917 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.54□□□□□ -1.52
PCDH17O14917 SS18L2P2-201ENST00000583960 235 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 Z82195.1-201ENST00000604558 398 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH17O14917 uc_338.26-201ENST00000612659 160 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 AL021918.2-201ENST00000613415 194 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH17O14917 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDH17O14917 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDH17O14917 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDH17O14917 AL049767.1-202ENST00000637826 242 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDH17O14917 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
PCDH17O14917 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PCDH17O14917 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH17O14917 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH17O14917 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH17O14917 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH17O14917 AC019072.1-201ENST00000604535 1551 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PCDH17O14917 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH17O14917 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH17O14917 AC017007.4-201ENST00000503353 1352 ntBASIC5.54□□□□□ -1.52
PCDH17O14917 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
PCDH17O14917 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDH17O14917 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH17O14917 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms