Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC073539.2-201ENST00000597113 165 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 AC113554.1-201ENST00000606284 490 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 RBM22P6-201ENST00000611682 867 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 ELMO2P1-202ENST00000614283 794 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 AC243830.2-201ENST00000618067 630 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 NAA50-211ENST00000630058 177 ntTSL 5 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USB1Q9BQ65 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 THUMPD3P1-201ENST00000506556 1480 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
USB1Q9BQ65 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USB1Q9BQ65 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USB1Q9BQ65 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USB1Q9BQ65 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USB1Q9BQ65 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USB1Q9BQ65 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USB1Q9BQ65 AL034417.4-202ENST00000642135 2236 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USB1Q9BQ65 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 AC125232.1-201ENST00000452554 1408 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 AL589993.1-201ENST00000407450 2524 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 RIT1-201ENST00000368322 855 ntTSL 3 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 GAS8-AS1-201ENST00000408886 435 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 RN7SKP139-201ENST00000410411 293 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 RPL37P10-201ENST00000412884 288 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC074085.1-201ENST00000413598 418 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 TPMTP2-201ENST00000414372 726 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC233981.1-201ENST00000423224 461 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 RANP5-201ENST00000427731 655 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 PRELID1P3-201ENST00000450055 643 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 RN7SL241P-201ENST00000482973 236 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC008799.1-201ENST00000495909 457 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 SUMO2P7-201ENST00000511179 285 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 HMGB1P41-201ENST00000520234 440 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 NRBF2P4-201ENST00000520874 850 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC138356.2-201ENST00000521192 667 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC107934.1-201ENST00000522215 217 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 ST13P6-201ENST00000522430 1102 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 AP000676.2-201ENST00000529711 301 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC024405.1-201ENST00000532521 1042 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 TBC1D29-201ENST00000579181 652 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 TBC1D29-204ENST00000584297 602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC005357.1-201ENST00000588399 301 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC010680.2-201ENST00000603521 2117 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 MIR6762-201ENST00000613340 86 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC245033.3-201ENST00000617986 224 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 TARS2P1-201ENST00000506124 2041 ntBASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.26□□□□□ -1.25
USB1Q9BQ65 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USB1Q9BQ65 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms