Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS33AQ96AX1 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS33AQ96AX1 AC006512.2-201ENST00000543250 486 ntBASIC5.22□□□□□ -1.57
VPS33AQ96AX1 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS33AQ96AX1 AC127024.5-201ENST00000580085 462 ntBASIC5.22□□□□□ -1.57
VPS33AQ96AX1 AC124856.1-201ENST00000600819 896 ntBASIC5.22□□□□□ -1.57
VPS33AQ96AX1 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS33AQ96AX1 AL162574.2-201ENST00000614618 657 ntBASIC5.22□□□□□ -1.57
VPS33AQ96AX1 AP002967.1-201ENST00000624203 539 ntBASIC5.22□□□□□ -1.57
VPS33AQ96AX1 AL390318.1-201ENST00000624564 687 ntBASIC5.22□□□□□ -1.57
VPS33AQ96AX1 OR8G3P-202ENST00000641572 1255 ntBASIC5.22□□□□□ -1.57
VPS33AQ96AX1 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VPS33AQ96AX1 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VPS33AQ96AX1 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS33AQ96AX1 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS33AQ96AX1 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VPS33AQ96AX1 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
VPS33AQ96AX1 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
VPS33AQ96AX1 SOCS5P3-201ENST00000425115 1576 ntBASIC5.21□□□□□ -1.57
VPS33AQ96AX1 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
VPS33AQ96AX1 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
VPS33AQ96AX1 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 RMRPP5-201ENST00000411156 267 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 AL160175.1-201ENST00000428124 247 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 HMGB1P5-202ENST00000451497 985 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 HMGB1P26-201ENST00000452520 628 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 RNU7-27P-201ENST00000459281 62 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 AC087672.1-201ENST00000479876 766 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 RN7SL809P-201ENST00000482040 297 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 AL117692.1-201ENST00000494283 713 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 AC016559.2-201ENST00000510759 359 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 RN7SKP183-201ENST00000517169 324 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 AP000648.1-201ENST00000529682 397 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 AC002310.3-201ENST00000569728 723 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 CBX3P2-202ENST00000583365 535 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 MIR3936-201ENST00000584304 110 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 AC015802.2-201ENST00000589690 189 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 AL137072.1-201ENST00000603444 466 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 AL031601.1-201ENST00000605702 394 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 AC004775.1-201ENST00000607389 753 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 AL445437.1-201ENST00000623157 3087 ntBASIC5.21□□□□□ -1.58
VPS33AQ96AX1 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS33AQ96AX1 SRRM1P3-201ENST00000426911 2678 ntBASIC5.2□□□□□ -1.58
VPS33AQ96AX1 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 NEPNP-201ENST00000404786 1371 ntBASIC5.2□□□□□ -1.58
VPS33AQ96AX1 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 RNU6-244P-201ENST00000391028 104 ntBASIC5.2□□□□□ -1.58
VPS33AQ96AX1 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 AC006326.1-201ENST00000445465 787 ntBASIC5.2□□□□□ -1.58
VPS33AQ96AX1 AC099063.2-201ENST00000446360 662 ntBASIC5.2□□□□□ -1.58
VPS33AQ96AX1 AC012512.1-201ENST00000446594 718 ntBASIC5.2□□□□□ -1.58
VPS33AQ96AX1 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 AP000547.1-201ENST00000454360 617 ntBASIC5.2□□□□□ -1.58
VPS33AQ96AX1 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 AC107398.1-201ENST00000486904 505 ntBASIC5.2□□□□□ -1.58
VPS33AQ96AX1 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms